RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 C12orf50Q8NA57 414 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 A0A087X1B8 175 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ABCB1P08183 1280 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 COMTP21964 271 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RAB14P61106 215 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 SH3RF3Q8TEJ3 882 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ST6GALNAC4Q9H4F1 302 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 NPHS2Q9NP85 383 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 TPRKBQ9Y3C4 175 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 TTLL3Q9Y4R7 772 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 KRT87PA6NCN2 255 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ATP6V1G2O95670 118 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 CTCFP49711 727 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ITGA8P53708 1063 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ANTXR2P58335 489 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 B3GNT6Q6ZMB0 384 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 FAM47EQ6ZV65 393 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 PLK2Q9NYY3 685 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 FGF10O15520 208 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RECQL5O94762 991 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 NPY2RP49146 381 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 TRIM16LQ309B1 348 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 TTC33Q6PID6 262 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ELMOD1Q8N336 334 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 MRPL46Q9H2W6 279 aaKnown RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 DICER1Q9UPY3 1922 aaKnown RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RIMBP2O15034 1052 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 KCNN4O15554 427 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 DNAJB5O75953 348 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RBP3P10745 1247 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 COL6A2P12110 1019 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 MSH3P20585 1137 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ARMCX4Q5H9R4 360 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 EPHA10Q5JZY3 1008 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF544Q6NX49 715 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 DRICH1Q6PGQ1 229 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF720Q7Z2F6 126 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 VPS45Q9NRW7 570 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ASAP1Q9ULH1 1129 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 GOLGA8SH3BPF8 625 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 VDRP11473 427 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 NCF4Q15080 339 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TSC22D1Q15714 1073 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CNGA2Q16280 664 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TMEM154Q6P9G4 183 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 RASGEF1CQ8N431 466 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 NDUFB9Q9Y6M9 179 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 PTF1AQ7RTS3 328 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 FAM151AQ8WW52 585 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CKAP2Q8WWK9 683 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TOP1MTQ969P6 601 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 SP110Q9HB58 689 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 AGPAT5Q9NUQ2 364 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 POLIQ9UNA4 740 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 QSOX1O00391 747 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 SERPINA6P08185 405 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 SPIDRQ14159 915 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 PIWIL4Q7Z3Z4 852 aaKnown RBP9.11□□□□□ -0.95
COL6A5-202ENST00000312481 C11orf70Q9BRQ4 267 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TLR10Q9BXR5 811 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 UBP1Q9NZI7 540 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 OGTO15294 1046 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 C21orf2O43822 256 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 LYPLA2O95372 231 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 SKP1P63208 163 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 MKL1Q969V6 931 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 MYRFQ9Y2G1 1151 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL6A5-202ENST00000312481 DTNAQ9Y4J8 743 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ECM29Q5VYK3 1845 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TK2O00142 265 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 KLRC1P26715 233 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 HARS2P49590 506 aaKnown RBP9.11□□□□□ -0.95
COL6A5-202ENST00000312481 MGAT5Q09328 741 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 SMARCB1Q12824 385 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 EMC10Q5UCC4 262 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ANKS3Q6ZW76 656 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 AP3S1Q92572 193 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 PNKPQ96T60 521 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ARHGEF38Q9NXL2 777 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 RIPK2O43353 540 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TRPA1O75762 1119 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 DDHD2O94830 711 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CYP1A1P04798 512 aaPredicted RBP9.11□□□□□ -0.95
COL6A5-202ENST00000312481 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TPBGLP0DKB5 382 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CHRNB3Q05901 458 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TCP10Q12799 353 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 TRIP10Q15642 601 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 DPP9Q86TI2 863 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF410Q86VK4 478 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 APPL2Q8NEU8 664 aa9.11□□□□□ -0.95
COL6A5-202ENST00000312481 CASKIN2Q8WXE0 1202 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms