RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LBHD1Q9BQE6 289 aaPredicted RBP23.61■■□□□ 1.37
IRF3-201ENST00000309877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.61■■□□□ 1.37
IRF3-201ENST00000309877 CXXC1Q9P0U4 656 aaPredicted RBP23.61■■□□□ 1.37
IRF3-201ENST00000309877 ZRANB2O95218 330 aaKnown RBP eCLIP23.6■■□□□ 1.37
IRF3-201ENST00000309877 ZBED1O96006 694 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 SOD2P04179 222 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 GLI1P08151 1106 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 USP17L7P0C7H9 530 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 DAOAP59103 153 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 YWHAZP63104 245 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 ATP11AP98196 1134 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 GPR17Q13304 367 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 PSMD5Q16401 504 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 CDO1Q16878 200 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 C15orf59Q2T9L4 293 aaPredicted RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 VSTM1Q6UX27 236 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 RNF168Q8IYW5 571 aaPredicted RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 FIBCD1Q8N539 461 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 ARFGAP1Q8N6T3 406 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 NOA1Q8NC60 698 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 TSC1Q92574 1164 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 NCAPGQ9BPX3 1015 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 VN1R3Q9BXE9 311 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 DDX56Q9NY93 547 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 SLC4A7Q9Y6M7 1214 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 MKI67P46013 3256 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 KRIT1O00522 736 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 KRT7P08729 469 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 PCK1P35558 622 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 CETN2P41208 172 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 MAGEA11P43364 429 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 PTPN9P43378 593 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 HTRA4P83105 476 aaPredicted RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 SMC1AQ14683 1233 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 RSPO2Q6UXX9 243 aaPredicted RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 POLNQ7Z5Q5 900 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 CCDC50Q8IVM0 306 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 EXD1Q8NHP7 514 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 PIK3R5Q8WYR1 880 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 HERVK_113Q902F9 699 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 DDX23Q9BUQ8 820 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 ZWILCHQ9H900 591 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 CHST7Q9NS84 486 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 RBM12Q9NTZ6 932 aaKnown RBP23.6■■□□□ 1.37
IRF3-201ENST00000309877 MTRRQ9UBK8 725 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 INSL6Q9Y581 213 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 PCDHB12Q9Y5F1 795 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 CDY1Q9Y6F8 540 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 VWA8A3KMH1 1905 aa23.6■■□□□ 1.37
IRF3-201ENST00000309877 TRIM66O15016 1216 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 DAB1O75553 588 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 MIPP30301 263 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 PPM1AP35813 382 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 MATKP42679 507 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 ELF2Q15723 593 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 SH3PXD2AQ5TCZ1 1133 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 RCOR2Q8IZ40 523 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 DEFB106AQ8N104 65 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 ATAD1Q8NBU5 361 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 FBXO22Q8NEZ5 403 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 SPPL2BQ8TCT7 592 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 FAM172AQ8WUF8 416 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 DPF3Q92784 378 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 HERC2P3Q9BVR0 1158 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 AP1M1Q9BXS5 423 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 MTIF3Q9H2K0 278 aaKnown RBP23.59■■□□□ 1.37
IRF3-201ENST00000309877 NGRNQ9NPE2 291 aaKnown RBP23.59■■□□□ 1.37
IRF3-201ENST00000309877 PCSK1NQ9UHG2 260 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 BACE2Q9Y5Z0 518 aa23.59■■□□□ 1.37
IRF3-201ENST00000309877 C2CD2LO14523 706 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 KRT1P04264 644 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 SLC25A11Q02978 314 aaKnown RBP23.58■■□□□ 1.37
IRF3-201ENST00000309877 ATP13A4Q4VNC1 1196 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 DDX53Q86TM3 631 aaKnown RBP23.58■■□□□ 1.37
IRF3-201ENST00000309877 MMGT1Q8N4V1 131 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 C2orf15Q8WU43 125 aaKnown RBP23.58■■□□□ 1.37
IRF3-201ENST00000309877 IRGQQ8WZA9 623 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 RBM41Q96IZ5 413 aaKnown RBP23.58■■□□□ 1.37
IRF3-201ENST00000309877 C8orf48Q96LL4 319 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 SLC9A7Q96T83 725 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 POPDC2Q9HBU9 364 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 USP18Q9UMW8 372 aa23.58■■□□□ 1.37
IRF3-201ENST00000309877 MTMR11A4FU01 709 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 GLUD2P49448 558 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 DCAF6Q58WW2 860 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 TXNRD3NBQ6F5E7 133 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 PM20D1Q6GTS8 502 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 CCDC70Q6NSX1 233 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 RNF19BQ6ZMZ0 732 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 SLC13A5Q86YT5 568 aaPredicted RBP23.57■■□□□ 1.36
IRF3-201ENST00000309877 HERC6Q8IVU3 1022 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 KLHL11Q9NVR0 708 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 GOLGA6L10A0A0M3HER8 536 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 DYNC1I1O14576 645 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 CAPN9O14815 690 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 PRPSAP2O60256 369 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 TRUB2O95900 331 aaKnown RBP23.57■■□□□ 1.36
IRF3-201ENST00000309877 IL1R2P27930 398 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 NOS2P35228 1153 aa23.57■■□□□ 1.36
IRF3-201ENST00000309877 SLC5A3P53794 718 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms