RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C2CD4BA6NLJ0 364 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 TTC30AQ86WT1 665 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 MAP7D3Q8IWC1 876 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 CMASQ8NFW8 434 aaPredicted RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 KLHL29Q96CT2 875 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 SGSM3Q96HU1 749 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 PIN4Q9Y237 131 aaKnown RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 A0A1B0GUA9 196 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 SNAI1O95863 264 aaPredicted RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 RBL1P28749 1068 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 NAT8LQ8N9F0 302 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 CXorf38Q8TB03 319 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC110Q8TBZ0 833 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 VTA1Q9NP79 307 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 MAD1L1Q9Y6D9 718 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 RASSF9O75901 435 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 ATP2A2P16615 1042 aaKnown RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 ADRA1DP25100 572 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 KCNJ2P63252 427 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 RNASELQ05823 741 aaKnown RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 TFDP2Q14188 446 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 SNCBQ16143 134 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC14Q49A88 953 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 VSIG1Q86XK7 387 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 RELL1Q8IUW5 271 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 IGDCC3Q8IVU1 814 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 RIBC1Q8N443 379 aaPredicted RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 RABGEF1Q9UJ41 708 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 PHTF1Q9UMS5 762 aa12.05□□□□□ -0.48
PTPN2-201ENST00000309660 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
PTPN2-201ENST00000309660 PTPN7P35236 360 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 OVGP1Q12889 678 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 DGKDQ16760 1214 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 LACTB2Q53H82 288 aaPredicted RBP12.04□□□□□ -0.48
PTPN2-201ENST00000309660 BSPRYQ5W0U4 402 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 LCLAT1Q6UWP7 414 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 NDRG1Q92597 394 aaKnown RBP12.04□□□□□ -0.48
PTPN2-201ENST00000309660 SNRNP25Q9BV90 132 aaKnown RBP12.04□□□□□ -0.48
PTPN2-201ENST00000309660 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 DCTN4Q9UJW0 460 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 C2CD2Q9Y426 696 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 RECQL4O94761 1208 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 MMP3P08254 477 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 DESP17661 470 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 FAM187BQ17R55 369 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 MARCH8Q5T0T0 291 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 MAMDC4Q6UXC1 1216 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 PPM1NQ8N819 430 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 WDR83Q9BRX9 315 aaKnown RBP12.04□□□□□ -0.48
PTPN2-201ENST00000309660 TRIM56Q9BRZ2 755 aaKnown RBP12.04□□□□□ -0.48
PTPN2-201ENST00000309660 GCOM2Q9BZD3 368 aaPredicted RBP12.04□□□□□ -0.48
PTPN2-201ENST00000309660 GRID1Q9ULK0 1009 aa12.04□□□□□ -0.48
PTPN2-201ENST00000309660 APOL1O14791 398 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 PFKMP08237 780 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 INHBAP08476 426 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 CYP2C9P11712 490 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 NR1H3Q13133 447 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ACVR2BQ13705 512 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 KBTBD12Q3ZCT8 623 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ZNF618Q5T7W0 954 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 CGB2Q6NT52 195 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ZNF449Q6P9G9 518 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 USP50Q70EL3 339 aaPredicted RBP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 DNAJB3Q8WWF6 145 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 RNF157Q96PX1 679 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 UBN1Q9NPG3 1134 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 PIH1D1Q9NWS0 290 aaKnown RBP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 EURLQ9NYK6 297 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 PAPSS1O43252 624 aaPredicted RBP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ADCY6O43306 1168 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 FAM155BO75949 473 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ASMTLO95671 621 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 GHRP10912 638 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 LMO2P25791 158 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 TCP10LQ8TDR4 215 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 TTC17Q96AE7 1141 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ERP27Q96DN0 273 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 CACNG4Q9UBN1 327 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 MGAMO43451 1857 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 OTOFQ9HC10 1997 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 A6NJR5 290 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 MT-ND3P03897 115 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 PCK1P35558 622 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ZNF200P98182 395 aaPredicted RBP12.03□□□□□ -0.48
PTPN2-201ENST00000309660 NOMO1Q15155 1222 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 MTFR1Q15390 333 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 ECHDC2Q86YB7 292 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 PLD5Q8N7P1 536 aa12.03□□□□□ -0.48
PTPN2-201ENST00000309660 SHCBP1Q8NEM2 672 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms