RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 PAPPAQ13219 1627 aa1.34□□□□□ -2.2
CEP290-201ENST00000309041 A0A0B4J269 797 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PABPN1LA6NDY0 278 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NOP56O00567 594 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 PER2O15055 1255 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PPFIA3O75145 1194 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PDCP20941 246 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RFC5P40937 340 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HNF4AP41235 474 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SLCO1A2P46721 670 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 REEP5Q00765 189 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RPL6Q02878 288 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 PUDPQ08623 228 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 UGCGQ16739 394 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CEP78Q5JTW2 689 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MRPL2Q5T653 305 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TTC39BQ5VTQ0 682 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NKAIN2Q5VXU1 208 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TANGO2Q6ICL3 276 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TMEM53Q6P2H8 277 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HS2ST1Q7LGA3 356 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GSTA5Q7RTV2 222 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 IFNL1Q8IU54 200 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 WDR75Q8IWA0 830 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 MSL3Q8N5Y2 521 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 CCDC71LQ8N9Z2 235 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 DAGLBQ8NCG7 672 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CCDC26Q8TAB7 109 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CAVIN3Q969G5 261 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ADGRG7Q96K78 797 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SLC9A7Q96T83 725 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CITED1Q99966 193 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 BEGAINQ9BUH8 593 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 XYLT2Q9H1B5 865 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RAVER2Q9HCJ3 691 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 CD209Q9NNX6 404 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 XPNPEP3Q9NQH7 507 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PRDM8Q9NQV8 689 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TRMT1Q9NXH9 659 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 RBAKQ9NYW8 714 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 LRIT1Q9P2V4 623 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 AGO2Q9UKV8 859 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SCAF8Q9UPN6 1271 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 MED16Q9Y2X0 877 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 COL2A1P02458 1487 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NLRP1Q9C000 1473 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TAF1LQ8IZX4 1826 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MEGF6O75095 1541 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 KNDC1Q76NI1 1749 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 UHRF1BP1Q6BDS2 1440 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 EFCAB7A8K855 629 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GOLGA6L22H0YM25 854 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PIP5K1BO14986 540 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TXNL1O43396 289 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TBX1O43435 398 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TBC1D4O60343 1298 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 KPNA6O60684 536 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CPNE3O75131 537 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SH3BGRLO75368 114 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 E2F6O75461 281 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 RPLP0P05388 317 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZFYP08048 801 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 NR2F1P10589 423 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SYT1P21579 422 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MGAT1P26572 445 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ABCG1P45844 678 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 UBE2HP62256 183 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 DUSP4Q13115 394 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CLN3Q13286 438 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SCARB2Q14108 478 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CRYMQ14894 314 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TEAD2Q15562 447 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TSC22D1Q15714 1073 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LDLRAP1Q5SW96 308 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ZC3HAV1Q7Z2W4 902 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 CLNKQ7Z7G1 428 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SFR1Q86XK3 245 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 Q8N1Y9 231 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GOLGA6L1Q8N7Z2 621 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FAM76AQ8TAV0 307 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 CALML6Q8TD86 181 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 LEO1Q8WVC0 666 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 RNF141Q8WVD5 230 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 HOXB13Q92826 284 aaPredicted RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 KAT2BQ92831 832 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TMA16Q96EY4 203 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 TSPAN17Q96FV3 270 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 SERAC1Q96JX3 654 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 PPP1R16BQ96T49 567 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MMP19Q99542 508 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 GPATCH1Q9BRR8 931 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SPATA9Q9BWV2 254 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 TFB2MQ9H5Q4 396 aaKnown RBP1.33□□□□□ -2.2
CEP290-201ENST00000309041 SYNCQ9H7C4 482 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MINPP1Q9UNW1 487 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 MTMR6Q9Y217 621 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 FAM96BQ9Y3D0 163 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 ASB4Q9Y574 426 aa1.33□□□□□ -2.2
CEP290-201ENST00000309041 EID1Q9Y6B2 187 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms