RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CCSER1Q9C0I3 900 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 RNPEPQ9H4A4 650 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 VAT1LQ9HCJ6 419 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 LZTFL1Q9NQ48 299 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 ST7Q9NRC1 585 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 ERVK13-1Q9NX77 482 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 PLA2G2DQ9UNK4 145 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 LUC7L2Q9Y383 392 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 INSL6Q9Y581 213 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 HCFC2Q9Y5Z7 792 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 EPN1Q9Y6I3 576 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 C2orf16Q68DN1 1984 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 TPRP12270 2363 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 BICDL2A1A5D9 508 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ERICH4A6NGS2 130 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 RSPH10B2B2RC85 870 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 EIF3CLB5ME19 914 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 H3BQF6 201 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CYR61O00622 381 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 PSMA7O14818 248 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 MBTPS2O43462 519 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SIGLEC6O43699 453 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CYTH3O43739 400 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 EFCAB14O75071 495 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 PPFIA4O75335 1185 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CFBP00751 764 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CHRNA1P02708 482 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 LGALS2P05162 132 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 PARP1P09874 1014 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 RSPH10BP0C881 870 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SMIM10L2AP0DMW4 78 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SMIM10L2BP0DMW5 78 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 MYCLP12524 364 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 HNRNPH3P31942 346 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 STX17P56962 302 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 NLRP5P59047 1200 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ZBED6P86452 979 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 RAD51AP2Q09MP3 1159 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CASP8Q14790 479 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 PGM5Q15124 567 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SMAD2Q15796 467 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ARHGEF16Q5VV41 709 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 OVOS1Q6IE37 1185 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 KLHL10Q6JEL2 608 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CCDC70Q6NSX1 233 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 RUFY4Q6ZNE9 571 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SPRED1Q7Z699 444 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 RTN4RL1Q86UN2 441 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 DGKHQ86XP1 1220 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ADHFE1Q8IWW8 467 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 DHX37Q8IY37 1157 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CARFQ8N187 725 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 C4orf32Q8N8J7 132 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 GIMAP8Q8ND71 665 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 PRSS33Q8NF86 280 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 NELFBQ8WX92 580 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ATP6V0A1Q93050 837 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ZBTB10Q96DT7 871 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SPATA33Q96N06 139 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 ERGIC2Q96RQ1 377 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 EIF3CQ99613 913 aaKnown RBP5.3□□□□□ -1.56
CKS1B-201ENST00000308987 TSGA10Q9BZW7 698 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 FAM107BQ9H098 131 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 AP5S1Q9NUS5 200 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 SETD4Q9NVD3 440 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 KBTBD4Q9NVX7 518 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CLDND1Q9NY35 253 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 GMIPQ9P107 970 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 VPS54Q9P1Q0 977 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 MAD2L2Q9UI95 211 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 MUTYHQ9UIF7 546 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 DOCK8Q8NF50 2099 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 CFAP47Q6ZTR5 3102 aa5.3□□□□□ -1.56
CKS1B-201ENST00000308987 EPG5Q9HCE0 2579 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 FRMPD4Q14CM0 1322 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 DENND4AQ7Z401 1863 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 TTC26A0AVF1 554 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 C5orf67F2Z3F1 127 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 IPO7O95373 1038 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PLEKHA8P1O95397 391 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 GLP2RO95838 553 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 AMHP03971 560 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ALADP13716 330 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ATP2B1P20020 1258 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ENDOUP21128 410 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CCNE1P24864 410 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 SMARCA1P28370 1054 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PRCPP42785 496 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 VSNL1P62760 191 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 AMPD3Q01432 767 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MVKQ03426 396 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 UBXN1Q04323 297 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MGAT3Q09327 533 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 TCF15Q12870 199 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 LPIN1Q14693 890 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ZNF174Q15697 407 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ASPRV1Q53RT3 343 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms