RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PABPC4LP0CB38 370 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 AMPD1P23109 780 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PRELPP51888 382 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 SLC5A3P53794 718 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 PRAMEP78395 509 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 ZNF200P98182 395 aaPredicted RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 MAPK7Q13164 816 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 NUP93Q8N1F7 819 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 ENDOVQ8N8Q3 282 aaKnown RBP10.88□□□□□ -0.67
MSRB3-201ENST00000308259 TSNARE1Q96NA8 513 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 TPK1Q9H3S4 243 aa10.88□□□□□ -0.67
MSRB3-201ENST00000308259 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 BIRC5O15392 142 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 FOXD2O60548 495 aaPredicted RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 POLR2MP0CAP2 368 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SRGAP2CP0DJJ0 459 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 GAP43P17677 238 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 KCTD2Q14681 263 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 PERM1Q5SV97 790 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 PADI6Q6TGC4 694 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 ASRGL1Q7L266 308 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 RPTORQ8N122 1335 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 WDR11Q9BZH6 1224 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 ANKFY1Q9P2R3 1169 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 A0A0A6YYK5 440 aaPredicted RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SLC16A4O15374 487 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 GSC2O15499 205 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 CLDN3O15551 220 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 CCNB1P14635 433 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 VCLP18206 1134 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 HMOX2P30519 316 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 RIPOR1Q6ZS17 1223 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 ACAD11Q709F0 780 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 USP50Q70EL3 339 aaPredicted RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 GTF3C2Q8WUA4 911 aaPredicted RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 CLPTM1LQ96KA5 538 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 TRABDQ9H4I3 376 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 HOXC10Q9NYD6 342 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 ATF2P15336 505 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 FOSL1P15407 271 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SP4Q02446 784 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 CTC1Q2NKJ3 1217 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 CEP78Q5JTW2 689 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 FKBP1CQ5VVH2 108 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 NRG4Q8WWG1 115 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 FAM136AQ96C01 138 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 AGAP3Q96P47 875 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 HAPLN3Q96S86 360 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 GRHL1Q9NZI5 618 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 FBXO40Q9UH90 709 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 DMTF1Q9Y222 760 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 KLHL41O60662 606 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SEC24DO94855 1032 aaPredicted RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 STT3AP46977 705 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 ALDH18A1P54886 795 aaKnown RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 CEP55Q53EZ4 464 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 MOXD1Q6UVY6 613 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SDR16C5Q8N3Y7 309 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 DDI1Q8WTU0 396 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 SNX25Q9H3E2 840 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 EHD1Q9H4M9 534 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 MARCOQ9UEW3 520 aaPredicted RBP10.87□□□□□ -0.67
MSRB3-201ENST00000308259 ANAPC5Q9UJX4 755 aa10.87□□□□□ -0.67
MSRB3-201ENST00000308259 C19orf81C9J6K1 198 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 ATP2A1O14983 1001 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 RIPK2O43353 540 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 ATP9BO43861 1147 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 TPPPO94811 219 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 SEMA3DO95025 777 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 CYP2C9P11712 490 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 NELFEP18615 380 aaKnown RBP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 VAMP7P51809 220 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 NSUN2Q08J23 767 aaKnown RBP eCLIP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 WDR45BQ5MNZ6 344 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 PLA2G4FQ68DD2 849 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 FAM83AQ86UY5 434 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 CBWD2Q8IUF1 395 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 TAB3Q8N5C8 712 aaPredicted RBP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 TNIP2Q8NFZ5 429 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 LMO3Q8TAP4 145 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 HDAC2Q92769 488 aaKnown RBP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 SYT11Q9BT88 431 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 HEMGNQ9BXL5 484 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 RGS17Q9UGC6 210 aaPredicted RBP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 FAM187AA6NFU0 413 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 NOP56O00567 594 aaKnown RBP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 PODXLO00592 558 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 IDO1P14902 403 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 TCEA1P23193 301 aaKnown RBP10.86□□□□□ -0.67
MSRB3-201ENST00000308259 NCKAP1LP55160 1127 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 NPEPPSP55786 919 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 PEX3P56589 373 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 NCOA4Q13772 614 aa10.86□□□□□ -0.67
MSRB3-201ENST00000308259 CLUL1Q15846 466 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms