RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 YBX2Q9Y2T7 364 aaKnown RBP13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C5orf67F2Z3F1 127 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CCDC188H7C350 402 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 H7C4K7 107 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TUBBP07437 444 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PYGMP11217 842 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PDGFRAP16234 1089 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PTPN9P43378 593 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ADCY1Q08828 1119 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SMARCB1Q12824 385 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NAA30Q147X3 362 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PPP2R5EQ16537 467 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GLE1Q53GS7 698 aaKnown RBP13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RSPO2Q6UXX9 243 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ARFGAP1Q8N6T3 406 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 KLHL23Q8NBE8 558 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NOA1Q8NC60 698 aaKnown RBP13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 EXD1Q8NHP7 514 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RXFP2Q8WXD0 754 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LRRC4Q9HBW1 653 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 DDX56Q9NY93 547 aaKnown RBP13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LAMA2P24043 3122 aaKnown RBP13.45□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SART1O43290 800 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RNF8O76064 485 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CA3P07451 260 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PBX2P40425 430 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MAP3K7CLP57077 242 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 COPS2P61201 443 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MRPS5P82675 430 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 DSG1Q02413 1049 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 HADHQ16836 314 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SEL1L2Q5TEA6 688 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ZNF280DQ6N043 979 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TRNP1Q6NT89 227 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ANKS3Q6ZW76 656 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CEP57Q86XR8 500 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GPR65Q8IYL9 337 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RCOR2Q8IZ40 523 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 EMC1Q8N766 993 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CENPIQ92674 756 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PIWIL1Q96J94 861 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C11orf84Q9BUA3 381 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 DMAP1Q9NPF5 467 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TMEM30AQ9NV96 361 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MTRRQ9UBK8 725 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RWDD3Q9Y3V2 267 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 BACE2Q9Y5Z0 518 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NLRC5Q86WI3 1866 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CHD9Q3L8U1 2897 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FSCN2O14926 492 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LILRB3O75022 631 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 HSF2BPO75031 334 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LRCH4O75427 683 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ZRANB2O95218 330 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FGGP02679 453 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 KRT7P08729 469 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LCP1P13796 627 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CTNNB1P35222 781 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FLT3P36888 993 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MAGEA11P43364 429 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GLUD2P49448 558 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SLC25A11Q02978 314 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TAF5Q15542 800 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CTXN3Q4LDR2 81 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PM20D1Q6GTS8 502 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PRSS55Q6UWB4 352 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SLC13A5Q86YT5 568 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SPATA2LQ8IUW3 424 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TDHQ8IZJ6 230 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 IRGQQ8WZA9 623 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 KCNK16Q96T55 309 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PBX4Q9BYU1 374 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RBM12Q9NTZ6 932 aaKnown RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SMARCAL1Q9NZC9 954 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 STK39Q9UEW8 545 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LZTS1Q9Y250 596 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PLXNA4Q9HCM2 1894 aa13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TARSL2A2RTX5 802 aaKnown RBP13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PIK3R2O00459 728 aa13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RB1P06400 928 aa13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 DESP17661 470 aa13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 BDNFP23560 247 aa13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SDC4P31431 198 aa13.43□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PTPN7P35236 360 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms