RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 CBFA2T2O43439 604 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SRFP11831 508 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PSMC3P17980 439 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FCARP24071 287 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 WEE1P30291 646 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ACADSBP45954 432 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PSEN1P49768 467 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TKTL1P51854 596 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 KIF11P52732 1056 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ADIGQ0VDE8 80 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 HECTD3Q5T447 861 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 DPY19L2P1Q6NXN4 242 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CCDC186Q7Z3E2 898 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TADA2BQ86TJ2 420 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SLC47A2Q86VL8 602 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FAM71AQ8IYT1 594 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CELF5Q8N6W0 485 aaKnown RBP11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ARL14EPQ8N8R7 260 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NOX5Q96PH1 765 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CDK5RAP1Q96SZ6 601 aaKnown RBP11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NAA15Q9BXJ9 866 aaKnown RBP11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SLC46A2Q9BY10 475 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TRPV4Q9HBA0 871 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TDP1Q9NUW8 608 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IL37Q9NZH6 218 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CHORDC1Q9UHD1 332 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NAGPAQ9UK23 515 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FBXL21Q9UKT6 434 aa11.58□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PI4K2BG5E9Z4 385 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TULP2O00295 520 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 EPHB6O15197 1021 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GFPT2O94808 682 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PRAMEF12O95522 483 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZBED1O96006 694 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CCDC172P0C7W6 258 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MBL2P11226 248 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RALAP11233 206 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 LCP1P13796 627 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 HDCP19113 662 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CLCN1P35523 988 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SOX5P35711 763 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 VIPR2P41587 438 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RGS7P49802 495 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TUBP50607 506 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SNX16P57768 344 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZXDAP98168 799 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PFKPQ01813 784 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GOLGA8FQ08AF8 430 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GOLGA8DPQ0D2H9 430 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GRM2Q14416 872 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZNF268Q14587 947 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PKDCCQ504Y2 493 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RAB41Q5JT25 222 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 VITQ6UXI7 678 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 DDX42Q86XP3 938 aaKnown RBP eCLIP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PASD1Q8IV76 773 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MFSD6LQ8IWD5 586 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SLC44A3Q8N4M1 653 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 BPIFB1Q8TDL5 484 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 KCTD13Q8WZ19 329 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GOLGA1Q92805 767 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 HSFY1Q96LI6 401 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NAP1L5Q96NT1 182 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ANP32EQ9BTT0 268 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TRMT61BQ9BVS5 477 aaKnown RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ULBP1Q9BZM6 244 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SMG9Q9H0W8 520 aaKnown RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 BRD9Q9H8M2 597 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CNGB3Q9NQW8 809 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 THG1LQ9NWX6 298 aaKnown RBP11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NCOR1O75376 2440 aa11.57□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 A0A1W2PQH9 124 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZNF263O14978 683 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SART1O43290 800 aaKnown RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 TLR5O60602 858 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 FBXO21O94952 628 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 OAS1P00973 400 aaKnown RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 COL4A2P08572 1712 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CYP11B1P15538 503 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 JAM2P57087 298 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 NR1I3Q14994 352 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 SNX30Q5VWJ9 437 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 BTBD8Q5XKL5 378 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 DENND1BQ6P3S1 775 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 RSRC2Q7L4I2 434 aaKnown RBP11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 ZNF677Q86XU0 584 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
CSPG4P2Y-201ENST00000306853 MSANTD4Q8NCY6 345 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms