RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ATXN2Q99700 1313 aaKnown RBP15.2■□□□□ 0.02
PTPN9-201ENST00000306726 AIM2O14862 343 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 LIASO43766 372 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 CUL3Q13618 768 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 DLK2Q6UY11 383 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 LRRC74BQ6ZQY2 392 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 GSDMBQ8TAX9 411 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ATP6V0A1Q93050 837 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 STK24Q9Y6E0 443 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 USP12O75317 370 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ASMTLO95671 621 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 RPL22P35268 128 aaKnown RBP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 VHLP40337 213 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 HUNKP57058 714 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ZNF200P98182 395 aaPredicted RBP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 SPATA24Q86W54 205 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ADPGKQ9BRR6 497 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 MAP3K20Q9NYL2 800 aaKnown RBP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ZNF862O60290 1169 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 SMNDC1O75940 238 aaKnown RBP eCLIP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 CIITAP33076 1130 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ASPHQ12797 758 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 CYTH1Q15438 398 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 PPP1R15BQ5SWA1 713 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 CRELD2Q6UXH1 353 aaPredicted RBP15.19■□□□□ 0.02
PTPN9-201ENST00000306726 PCGF5Q86SE9 256 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 ADAM32Q8TC27 787 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 PPP4R1Q8TF05 950 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
PTPN9-201ENST00000306726 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 IVDP26440 423 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 OGDHQ02218 1023 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 LMNB2Q03252 620 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 TMEM62Q0P6H9 643 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 TMEM63BQ5T3F8 832 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 LBX2Q6XYB7 198 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 ANKRD23Q86SG2 305 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 MARK4Q96L34 752 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 MIPEPQ99797 713 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SH3GL3Q99963 347 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 E9PBE3 544 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 KLHL41O60662 606 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 USP4Q13107 963 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 ACAP1Q15027 740 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SPRYD7Q5W111 196 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 CATSPERGQ6ZRH7 1159 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 CRLF3Q8IUI8 442 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 IGDCC3Q8IVU1 814 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 ABRAQ8N0Z2 381 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 GRAMD1AQ96CP6 724 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 ERLEC1Q96DZ1 483 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SERAC1Q96JX3 654 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 DCLRE1BQ9H816 532 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 CISHQ9NSE2 258 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SCINQ9Y6U3 715 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 IQANK1A0A1B0GTG1 560 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 CAV1Q03135 178 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SREBF2Q12772 1141 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 MKRN3Q13064 507 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 MFSD5Q6N075 450 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 NCAPG2Q86XI2 1143 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 LRRC43Q8N309 656 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 RNF217Q8TC41 542 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 EBF4Q9BQW3 602 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 MAGEB5Q9BZ81 275 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 IRX1P78414 480 aaPredicted RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 TMED1Q13445 227 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 BLMHQ13867 455 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 PDK4Q16654 411 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 DENND1BQ6P3S1 775 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SPNS2Q8IVW8 549 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 ZCCHC9Q8N567 271 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 USP13Q92995 863 aaPredicted RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SGF29Q96ES7 293 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 DNAJC1Q96KC8 554 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 DHX35Q9H5Z1 703 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 TAS2R1Q9NYW7 299 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
PTPN9-201ENST00000306726 SMG5Q9UPR3 1016 aaKnown RBP15.18■□□□□ 0.02
PTPN9-201ENST00000306726 PRR5-ARHGAP8B1AHC4 643 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 TMEM63AO94886 807 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 PDGFRAP16234 1089 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 ARHGAP8P85298 464 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 BST1Q10588 318 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 TFDP3Q5H9I0 405 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 SLC39A4Q6P5W5 647 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 RCOR2Q8IZ40 523 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 CD101Q93033 1021 aa15.17■□□□□ 0.02
PTPN9-201ENST00000306726 SLC7A6OSQ96CW6 309 aaPredicted RBP15.17■□□□□ 0.02
PTPN9-201ENST00000306726 BTBD10Q9BSF8 475 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms