RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RUVBL2Q9Y230 463 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 RBM7Q9Y580 266 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
TRIM56-201ENST00000306085 DGCR6Q14129 220 aa13.82□□□□□ -0.2
TRIM56-201ENST00000306085 ACLYP53396 1101 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SERAC1Q96JX3 654 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PPP1R10Q96QC0 940 aaKnown RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 H3BMM5 538 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 WWP2O00308 870 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PMPCBO75439 489 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF37AP17032 561 aaPredicted RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 CYP24A1Q07973 514 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 DCAF6Q58WW2 860 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SWSAP1Q6NVH7 229 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 FAM220AQ7Z4H9 259 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 VPS33AQ96AX1 596 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 C12orf4Q9NQ89 552 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF112Q9UJU3 913 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 KLHL41O60662 606 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ATP9AO75110 1047 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 VCLP18206 1134 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PIGHQ14442 188 aaPredicted RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 DENND1BQ6P3S1 775 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 AGPAT1Q99943 283 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 HEY2Q9UBP5 337 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 RESTQ13127 1097 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 CDH18Q13634 790 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF846Q147U1 533 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 TMEM132DQ14C87 1099 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SEL1L3Q68CR1 1132 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 MAML3Q96JK9 1138 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 OR7A10O76100 309 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SUPT7LO94864 414 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 TFB1MQ8WVM0 346 aaKnown RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 GSDMCQ9BYG8 508 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 CD209Q9NNX6 404 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PABPC1P11940 636 aaKnown RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 TTLL9Q3SXZ7 439 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 TRAPPC9Q96Q05 1148 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ING4Q9UNL4 249 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ITIH2P19823 946 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 PYHIN1Q6K0P9 492 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 RNF19BQ6ZMZ0 732 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 BDH2Q9BUT1 245 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 NUAK2Q9H093 628 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 MRPS7Q9Y2R9 242 aaKnown RBP13.81□□□□□ -0.2
TRIM56-201ENST00000306085 SPAG6O75602 509 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 LINC00523Q86TU6 105 aa13.81□□□□□ -0.2
TRIM56-201ENST00000306085 ADCY6O43306 1168 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 BTBD9Q96Q07 612 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 C1orf50Q9BV19 199 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 KANSL1LA0AUZ9 987 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 FGFR3P22607 806 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ITGA8P53708 1063 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CLVS1Q8IUQ0 354 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CITED4Q96RK1 184 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 PRKD2Q9BZL6 878 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CCDC59Q9P031 241 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CRKP46108 304 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CLK2P49760 499 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CDK8P49336 464 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 HARS2P49590 506 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 VPS33BQ9H267 617 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 TTC26A0AVF1 554 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 C2orf81A6NN90 581 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 PRR12Q9ULL5 1215 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 KCNJ6P48051 423 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 COLGALT2Q8IYK4 626 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 TDRD5Q8NAT2 981 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ASB14A6NK59 587 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 MGRN1O60291 552 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 OR6A2O95222 327 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 THRAP10827 490 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ALKBH2Q6NS38 261 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 NEK7Q8TDX7 302 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 KAT2BQ92831 832 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 MMP19Q99542 508 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 STK33Q9BYT3 514 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms