RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ZNF707Q96C28 371 aaPredicted RBP28.55■■■□□ 2.16
HDAC3-201ENST00000305264 SFXN1Q9H9B4 322 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 IL37Q9NZH6 218 aa28.55■■■□□ 2.16
HDAC3-201ENST00000305264 C2orf16Q68DN1 1984 aa28.54■■■□□ 2.16
HDAC3-201ENST00000305264 CCDC195A0A1B0GUA6 201 aa28.54■■■□□ 2.16
HDAC3-201ENST00000305264 TBX10O75333 385 aa28.54■■■□□ 2.16
HDAC3-201ENST00000305264 RTN3O95197 1032 aaPredicted RBP28.54■■■□□ 2.16
HDAC3-201ENST00000305264 FOSL2P15408 326 aa28.54■■■□□ 2.16
HDAC3-201ENST00000305264 CTC1Q2NKJ3 1217 aa28.54■■■□□ 2.16
HDAC3-201ENST00000305264 TTLL2Q9BWV7 592 aa28.54■■■□□ 2.16
HDAC3-201ENST00000305264 CALB1P05937 261 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 GALCP54803 685 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 SPA17Q15506 151 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 TMC5Q6UXY8 1006 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ITIH5Q86UX2 942 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 PRKD2Q9BZL6 878 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ZNF334Q9HCZ1 680 aaPredicted RBP28.53■■■□□ 2.16
HDAC3-201ENST00000305264 CNGB3Q9NQW8 809 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 HCFC1R1Q9NWW0 138 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 CLDND1Q9NY35 253 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ASB3Q9Y575 518 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 NCANO14594 1321 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ZBED1O96006 694 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 SRGAP2BP0DMP2 458 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 YWHAQP27348 245 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 DLX2Q07687 328 aaPredicted RBP28.53■■■□□ 2.16
HDAC3-201ENST00000305264 COL19A1Q14993 1142 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 TAF12Q16514 161 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 OR6B2Q6IFH4 312 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ANKRD54Q6NXT1 300 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 BHLHA9Q7RTU4 235 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ELMOD1Q8N336 334 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 ZNF653Q96CK0 615 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 THAP2Q9H0W7 228 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 FBXO44Q9H4M3 255 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 CLEC1BQ9P126 229 aa28.53■■■□□ 2.16
HDAC3-201ENST00000305264 CHORDC1Q9UHD1 332 aaPredicted RBP28.53■■■□□ 2.16
HDAC3-201ENST00000305264 FAM92AA1XBS5 289 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 IPO7O95373 1038 aaKnown RBP28.52■■■□□ 2.16
HDAC3-201ENST00000305264 RRM1P23921 792 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 DAOAP59103 153 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 OLFML1Q6UWY5 402 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 VCPIP1Q96JH7 1222 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 ZNF512Q96ME7 567 aaPredicted RBP28.52■■■□□ 2.16
HDAC3-201ENST00000305264 APOL5Q9BWW9 433 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 TFR2Q9UP52 801 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 PCDHA13Q9Y5I0 950 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 PRUNE2Q8WUY3 3088 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 OBSL1O75147 1896 aa28.52■■■□□ 2.16
HDAC3-201ENST00000305264 SNX16P57768 344 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 TAF10Q12962 218 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 RARS2Q5T160 578 aaKnown RBP28.51■■■□□ 2.16
HDAC3-201ENST00000305264 PM20D1Q6GTS8 502 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 SYCE2Q6PIF2 218 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 EP400NLQ6ZTU2 488 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 HS6ST3Q8IZP7 471 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 FBXO32Q969P5 355 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 TRMT2BQ96GJ1 504 aaKnown RBP28.51■■■□□ 2.16
HDAC3-201ENST00000305264 MYRFLQ96LU7 910 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 STRIP2Q9ULQ0 834 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 SCML2Q9UQR0 700 aa28.51■■■□□ 2.16
HDAC3-201ENST00000305264 NOTCH4Q99466 2003 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 GOLGA8SH3BPF8 625 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 XYLBO75191 536 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 FBXO21O94952 628 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 H2AFZP0C0S5 128 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 MAGEA1P43355 309 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 PGFP49763 221 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 MRPS5P82675 430 aaKnown RBP28.51■■■□□ 2.15
HDAC3-201ENST00000305264 CCDC85BQ15834 202 aaPredicted RBP28.51■■■□□ 2.15
HDAC3-201ENST00000305264 H2AFVQ71UI9 128 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 TMC8Q8IU68 726 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 CORO1BQ9BR76 489 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 LRRC3Q9BY71 257 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 GMIPQ9P107 970 aa28.51■■■□□ 2.15
HDAC3-201ENST00000305264 ANKRD62A6NC57 917 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 PAPLNO95428 1278 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 LTBRP36941 435 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 TAF5Q15542 800 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 CMASQ8NFW8 434 aaPredicted RBP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 ARHGEF26Q96DR7 871 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 MCRS1Q96EZ8 462 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 COMMD8Q9NX08 183 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 DNMT3BQ9UBC3 853 aaKnown RBP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 CNOT8Q9UFF9 292 aaKnown RBP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 YJEFN3A6XGL0 299 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 E7ENQ6 273 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 GJB6O95452 261 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 POU2F2P09086 479 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 GSCP56915 257 aaPredicted RBP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 C10orf76Q5T2E6 689 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 SCML4Q8N228 414 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 SMG7Q92540 1137 aaKnown RBP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 PABPC5Q96DU9 382 aaKnown RBP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 TRIM11Q96F44 468 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 CDH22Q9UJ99 828 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 ADGRG1Q9Y653 693 aa28.5■■■□□ 2.15
HDAC3-201ENST00000305264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.5■■■□□ 2.15
HDAC3-201ENST00000305264 NCK2O43639 380 aa28.49■■■□□ 2.15
HDAC3-201ENST00000305264 SLC6A3Q01959 620 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms