RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 KANSL3Q9P2N6 904 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TSPAN16Q9UKR8 245 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TRIM33Q9UPN9 1127 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 PCNTO95613 3336 aa7.54□□□□□ -1.2
RGPD3-201ENST00000304514 TM9SF1O15321 606 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 CSDE1O75534 798 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 WFS1O76024 890 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 IL1BP01584 269 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 MMP3P08254 477 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SSTR1P30872 391 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 YARSP54577 528 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 C15orf59Q2T9L4 293 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 KLHL38Q2WGJ6 581 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PPP1R26Q5T8A7 1209 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 BNIPLQ7Z465 357 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 C4orf33Q8N1A6 199 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ATP11CQ8NB49 1132 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 HEXIM2Q96MH2 286 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SMC6Q96SB8 1091 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 NOD2Q9HC29 1040 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 VTA1Q9NP79 307 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 BCLAF3A2AJT9 711 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 A8MUI8 341 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 POC1B-GALNT4F8VUJ3 575 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 YWHAZP63104 245 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 CA9Q16790 459 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SLC35F5Q8WV83 523 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PPP1R16BQ96T49 567 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 KLHL14Q9P2G3 628 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 CHKBQ9Y259 395 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PPEF2O14830 753 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SNAI1O95863 264 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 KRT16P08779 473 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 HOXA11P31270 313 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PHBP35232 272 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SLC18A2Q05940 514 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 DCAF4L1Q3SXM0 396 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 GBP7Q8N8V2 638 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 RSAD2Q8WXG1 361 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 RNF157Q96PX1 679 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 CNPY3Q9BT09 278 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PLXNA3P51805 1871 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 P4HA1P13674 534 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 KRT4P19013 534 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ETV4P43268 484 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 GTF2A1P52655 376 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 IGBP1P78318 339 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SPARCL1Q14515 664 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PDK2Q15119 407 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 FAM102AQ5T9C2 384 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PMF1Q6P1K2 205 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 TLDC1Q6P9B6 456 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF410Q86VK4 478 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 C12orf29Q8N999 325 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 CCDC63Q8NA47 563 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 DPEP3Q9H4B8 488 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 KCNK13Q9HB14 408 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PCSK1NQ9UHG2 260 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 PIK3R2O00459 728 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 MDM4O15151 490 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 UNC5CO95185 931 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 TFE3P19532 575 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ZKSCAN8Q15776 578 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 GJC2Q5T442 439 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 LVRNQ6Q4G3 990 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ARCQ7LC44 396 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 TMEM110Q86TL2 294 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SLC44A1Q8WWI5 657 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 RXFP2Q8WXD0 754 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 ZNF75CPQ92670 426 aaPredicted RBP7.53□□□□□ -1.2
RGPD3-201ENST00000304514 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 SLC17A7Q9P2U7 560 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 TUBGCP4Q9UGJ1 667 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 KIAA1257Q9ULG3 409 aa7.53□□□□□ -1.2
RGPD3-201ENST00000304514 NYNRINQ9P2P1 1898 aaKnown RBP7.52□□□□□ -1.2
RGPD3-201ENST00000304514 MYO16Q9Y6X6 1858 aa7.52□□□□□ -1.2
RGPD3-201ENST00000304514 CHUKO15111 745 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 T-ENOLP0DO92 83 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 CD19P15391 556 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 SMPD1P17405 629 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 CCNFP41002 786 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 SLC6A3Q01959 620 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 OTOAQ7RTW8 1153 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 CAND1Q86VP6 1230 aaKnown RBP7.52□□□□□ -1.21
RGPD3-201ENST00000304514 SULF1Q8IWU6 871 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 PITPNM3Q9BZ71 974 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 EBF2Q9HAK2 575 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 POPDC2Q9HBU9 364 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 HESX1Q9UBX0 185 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 TCRBV9S1A1TA0A576 114 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 MCF2LO15068 1137 aa7.52□□□□□ -1.21
RGPD3-201ENST00000304514 AVILO75366 819 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms