RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 UGT3A1Q6NUS8 523 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 AGO4Q9HCK5 861 aaKnown RBP14.41□□□□□ -0.1
PRKCB-201ENST00000303531 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 TXNRD3Q86VQ6 643 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 WDR49Q8IV35 697 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 CNPY3Q9BT09 278 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 EFCAB1Q9HAE3 211 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 SPATA31A5Q5VU36 1347 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 SPATA31A7Q8IWB4 1347 aa14.41□□□□□ -0.1
PRKCB-201ENST00000303531 NCF1BA6NI72 391 aaPredicted RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 C2orf81A6NN90 581 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 NCF1CA8MVU1 366 aaPredicted RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 VTNP04004 478 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 NCF1P14598 390 aaPredicted RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 PLIN5Q00G26 463 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 RUNX1T1Q06455 604 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 MRPL28Q13084 256 aaKnown RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 SV2AQ7L0J3 742 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 PAWRQ96IZ0 340 aaKnown RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 TCRBV5S4A2TA0A5A2 114 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 BGNP21810 368 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 BCAT1P54687 386 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 STRA8Q7Z7C7 330 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 BHMTQ93088 406 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 FAR2Q96K12 515 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 UBE2OQ9C0C9 1292 aaKnown RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 PXMP2Q9NR77 195 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 PDP2Q9P2J9 529 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CCDC60Q8IWA6 550 aaPredicted RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 ZNF786Q8N393 782 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 APOL2Q9BQE5 337 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 PALMDQ9NP74 551 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 PIK3CDO00329 1044 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 NFIBO00712 420 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 FAM131BQ86XD5 332 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 ADGRF2Q8IZF7 708 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CYP4F12Q9HCS2 524 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 SLC24A2Q9UI40 661 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 B3GAT3O94766 335 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 KRT8P05787 483 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CALB2P22676 271 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CDH18Q13634 790 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 SEL1L3Q68CR1 1132 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CCDC81Q6ZN84 652 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 C4orf19Q8IY42 314 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CCDC126Q96EE4 140 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 ABCA9Q8IUA7 1624 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 CYB561D2O14569 222 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 MZF1P28698 734 aaPredicted RBP14.4□□□□□ -0.1
PRKCB-201ENST00000303531 SOX10P56693 466 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 TMEM176AQ96HP8 235 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 AK9Q5TCS8 1911 aa14.4□□□□□ -0.1
PRKCB-201ENST00000303531 USP1O94782 785 aa14.4□□□□□ -0.11
PRKCB-201ENST00000303531 UBOX5O94941 541 aa14.4□□□□□ -0.11
PRKCB-201ENST00000303531 YY1P25490 414 aa14.4□□□□□ -0.11
PRKCB-201ENST00000303531 ZNF333Q96JL9 665 aa14.4□□□□□ -0.11
PRKCB-201ENST00000303531 NAT9Q9BTE0 207 aa14.4□□□□□ -0.11
PRKCB-201ENST00000303531 EHD4Q9H223 541 aa14.4□□□□□ -0.11
PRKCB-201ENST00000303531 EIF3LQ9Y262 564 aaKnown RBP14.4□□□□□ -0.11
PRKCB-201ENST00000303531 NME5P56597 212 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 RASA2Q15283 850 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 GALNTL6Q49A17 601 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 BNC2Q6ZN30 1099 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 LRRN4CLQ8ND94 238 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 RXFP2Q8WXD0 754 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 NUDT12Q9BQG2 462 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 H2AFY2Q9P0M6 372 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TMX2Q9Y320 296 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 ZSCAN5CA6NGD5 496 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 SARSP49591 514 aaKnown RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 ZNF177Q13360 481 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 KPNB1Q14974 876 aaKnown RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 MIB1Q86YT6 1006 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 MICU2Q8IYU8 434 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TATDN2Q93075 761 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 SPASTQ9UBP0 616 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 APPL1Q9UKG1 709 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 PCDHB7Q9Y5E2 793 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 CCDC159P0C7I6 412 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 BMPR2Q13873 1038 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 DDTLA6NHG4 134 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 F9P00740 461 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TAL1P17542 331 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 SLC11A2P49281 568 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 BACE1P56817 501 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TAGLN3Q9UI15 199 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 NAALADL1Q9UQQ1 740 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TM9SF1O15321 606 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 RIPK2O43353 540 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 CACHD1Q5VU97 1274 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 ITSN1Q15811 1721 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 C2CD2LO14523 706 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 PTPN11Q06124 597 aaPredicted RBP14.39□□□□□ -0.11
PRKCB-201ENST00000303531 WASHC5Q12768 1159 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 TTLL9Q3SXZ7 439 aa14.39□□□□□ -0.11
PRKCB-201ENST00000303531 NT5DC1Q5TFE4 455 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms