RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FAM45AQ8TCE6 357 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TMEM79Q9BSE2 394 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 KLHL31Q9H511 634 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 WWOXQ9NZC7 414 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MYH9P35579 1960 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 DGUOKQ16854 277 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CDKAL1Q5VV42 579 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CCDC81Q6ZN84 652 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 FGD2Q7Z6J4 655 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TLK2Q86UE8 772 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 OXNAD1Q96HP4 312 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MUC3BQ9H195 1237 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.89□□□□□ -1.152e-8■■□□□ 12.8
SF3B3-201ENST00000302516 RPS6KA5O75582 802 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 AQP5P55064 265 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 C1QBPQ07021 282 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TIMM50Q3ZCQ8 353 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ACCSLQ4AC99 568 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 FBXL16Q8N461 479 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 FBXO36Q8NEA4 188 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MDM1Q8TC05 714 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 GDPD5Q8WTR4 605 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 C15orf38-AP3S2A0A0A6YYH1 394 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ODC1P11926 461 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ATXN3P54252 364 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 HLFQ16534 295 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 IER5Q5VY09 327 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ZBTB49Q6ZSB9 765 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 TMC3Q7Z5M5 1100 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ARPINQ7Z6K5 226 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 DCP1BQ8IZD4 617 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MTERF3Q96E29 417 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 WRNIP1Q96S55 665 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CPNE1Q99829 537 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 RPAP3Q9H6T3 665 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 RGL1Q9NZL6 768 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 RPS6KL1Q9Y6S9 549 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 A0A087WXM4 84 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CD3EAPO15446 510 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 RGS5O15539 181 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 FAM200BP0CF97 657 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 GPSM2P81274 684 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 PRKCEQ02156 737 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 BTKQ06187 659 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 SPANXN2Q5MJ10 180 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 DENND1BQ6P3S1 775 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 KYAT3Q6YP21 454 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 WDR60Q8WVS4 1066 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 CDC42EP4Q9H3Q1 356 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 ANKZF1Q9H8Y5 726 aa7.89□□□□□ -1.15
SF3B3-201ENST00000302516 DMAP1Q9NPF5 467 aaPredicted RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 RSL24D1Q9UHA3 163 aaKnown RBP7.89□□□□□ -1.15
SF3B3-201ENST00000302516 MYOM1P52179 1685 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ATP9AO75110 1047 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 F9P00740 461 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 MAPTP10636 758 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 CYP11B1P15538 503 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ARMC4Q5T2S8 1044 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PLA2G4FQ68DD2 849 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 IPMKQ8NFU5 416 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 RIN2Q8WYP3 895 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 HPDLQ96IR7 371 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 VCPIP1Q96JH7 1222 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SPON2Q9BUD6 331 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SPATA31D1Q6ZQQ2 1576 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ATMINO43313 823 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 DGKIO75912 1065 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PDHBP11177 359 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 FASP25445 335 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PRKAA1Q13131 559 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PDPK2PQ6A1A2 396 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 HHIPL2Q6UWX4 724 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 RTL3Q8N8U3 475 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SLC44A5Q8NCS7 719 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 COQ7Q99807 217 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 CLEC4MQ9H2X3 399 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SERHL2Q9H4I8 314 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 TRPC7Q9HCX4 862 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SERHLQ9NQF3 203 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PDGFCQ9NRA1 345 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 METTL5Q9NRN9 209 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 AGPAT3Q9NRZ7 376 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 DSEQ9UL01 958 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 AGAP1Q9UPQ3 857 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 CPB1P15086 417 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 CHI3L1P36222 383 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ERVK-24P63145 666 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 KLHL12Q53G59 568 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 COBLL1Q53SF7 1204 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 EID3Q8N140 333 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 TRPC4APQ8TEL6 797 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 MOCS2O96007 188 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SERPINE1P05121 402 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 KLK7P49862 253 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 RPS6P62753 249 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 DCTN2Q13561 401 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 IFNEQ86WN2 208 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 RAD21L1Q9H4I0 556 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 STN1Q9H668 368 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 IL1RL2Q9HB29 575 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms