RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MIPP30301 263 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 GRIK1P39086 918 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 ARPP19P56211 112 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 SMTNL2Q2TAL5 461 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 SH3PXD2AQ5TCZ1 1133 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 TXNRD3NBQ6F5E7 133 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 ZNF365Q70YC5 407 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 SLC13A5Q86YT5 568 aaPredicted RBP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 ACSF2Q96CM8 615 aaPredicted RBP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 FUBP3Q96I24 572 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 RBM41Q96IZ5 413 aaKnown RBP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 PGLYRP2Q96PD5 576 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 KRT12Q99456 494 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 NGRNQ9NPE2 291 aaKnown RBP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 DDX56Q9NY93 547 aaKnown RBP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 MRPL42Q9Y6G3 142 aaKnown RBP13.61□□□□□ -0.23
CCDC7-202ENST00000302316 PTPRDP23468 1912 aa13.61□□□□□ -0.23
CCDC7-202ENST00000302316 CCDC188H7C350 402 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 SART1O43290 800 aaKnown RBP13.6□□□□□ -0.23
CCDC7-202ENST00000302316 DAB1O75553 588 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 USP17L7P0C7H9 530 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 LAG3P18627 525 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 IL1R2P27930 398 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PCK1P35558 622 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PTPN9P43378 593 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 DAOAP59103 153 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 C8orf74Q6P047 294 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PRSS55Q6UWB4 352 aaPredicted RBP13.6□□□□□ -0.23
CCDC7-202ENST00000302316 KLHL7Q8IXQ5 586 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 TMEM169Q96HH4 297 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PCSK1NQ9UHG2 260 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 USP18Q9UMW8 372 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PCDHB5Q9Y5E4 795 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 ZBED1O96006 694 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 GLI1P08151 1106 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 CETN2P41208 172 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 YWHAZP63104 245 aaKnown RBP13.6□□□□□ -0.23
CCDC7-202ENST00000302316 KCNT1Q5JUK3 1230 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 SCN4BQ8IWT1 228 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 DEFB106AQ8N104 65 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
CCDC7-202ENST00000302316 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
CCDC7-202ENST00000302316 PTPRSQ13332 1948 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 PRPSAP2O60256 369 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 EFEMP2O95967 443 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 MATKP42679 507 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 SLC5A3P53794 718 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 RAB6CQ53S08 254 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 KIAA1841Q6NSI8 718 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 PSRC1Q6PGN9 363 aaPredicted RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 RSPO2Q6UXX9 243 aaPredicted RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 RCOR2Q8IZ40 523 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 COLGALT1Q8NBJ5 622 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 SLITRK1Q96PX8 696 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 LRRC1Q9BTT6 524 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 RAB6CQ9H0N0 254 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
CCDC7-202ENST00000302316 POPDC2Q9HBU9 364 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 MTUS1Q9ULD2 1270 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
CCDC7-202ENST00000302316 TCRBV7S2A1N4TA0A589 114 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 CARNS1A5YM72 827 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 YJEFN3A6XGL0 299 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 E7ENQ6 273 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 TBC1D4O60343 1298 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 RALAP11233 206 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 SYN1P17600 705 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 TFE3P19532 575 aaPredicted RBP13.58□□□□□ -0.23
CCDC7-202ENST00000302316 SULT1E1P49888 294 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 EPHB4P54760 987 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.23
CCDC7-202ENST00000302316 IFRD2Q12894 506 aaPredicted RBP13.58□□□□□ -0.23
CCDC7-202ENST00000302316 GPR17Q13304 367 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 PSMD5Q16401 504 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 DCAF6Q58WW2 860 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 SCYL2Q6P3W7 929 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 VSTM1Q6UX27 236 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 HFE2Q6ZVN8 426 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.23
CCDC7-202ENST00000302316 ATAD1Q8NBU5 361 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 ANKRD7Q92527 254 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 RAPGEF5Q92565 580 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 HSPH1Q92598 858 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 SLC2A13Q96QE2 648 aa13.58□□□□□ -0.23
CCDC7-202ENST00000302316 PEBP4Q96S96 227 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms