RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
TPM3-202ENST00000302206 TRNP1Q6NT89 227 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CD300LGQ6UXG3 332 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 PAQR9Q6ZVX9 377 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 BBS12Q6ZW61 710 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 DDX42Q86XP3 938 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM3-202ENST00000302206 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 MYCBPAPQ8TBZ2 947 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 URGCPQ8TCY9 931 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CCHCR1Q8TD31 782 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 RSPH1Q8WYR4 309 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
TPM3-202ENST00000302206 NKD2Q969F2 451 aaPredicted RBP12.57□□□□□ -0.4
TPM3-202ENST00000302206 SUSD3Q96L08 255 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 ACBD6Q9BR61 282 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 C11orf84Q9BUA3 381 aaPredicted RBP12.57□□□□□ -0.4
TPM3-202ENST00000302206 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
TPM3-202ENST00000302206 HEMGNQ9BXL5 484 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 DPH5Q9H2P9 285 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 PLEKHA4Q9H4M7 779 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 C11orf49Q9H6J7 331 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CRTAC1Q9NQ79 661 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 GRHL1Q9NZI5 618 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 WHRNQ9P202 907 aa12.57□□□□□ -0.4
TPM3-202ENST00000302206 TSC2P49815 1807 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PI4K2BG5E9Z4 385 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 NDC80O14777 642 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 LIASO43766 372 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PRPSAP2O60256 369 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 OPA1O60313 960 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 ATP2C2O75185 946 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 FBXO21O94952 628 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PARNO95453 639 aaKnown RBP12.56□□□□□ -0.4
TPM3-202ENST00000302206 POMCP01189 267 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 FAM200BP0CF97 657 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 TKTP29401 623 aaKnown RBP12.56□□□□□ -0.4
TPM3-202ENST00000302206 OAS2P29728 719 aaKnown RBP12.56□□□□□ -0.4
TPM3-202ENST00000302206 ARSEP51690 589 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 NUBP1P53384 320 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 FAM193AP78312 1265 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 CBX1P83916 185 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 CAV1Q03135 178 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 DSC1Q08554 894 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PDK2Q15119 407 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 MDH1BQ5I0G3 518 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 KIAA0319Q5VV43 1072 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 LRIG3Q6UXM1 1119 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 ANKS1BQ7Z6G8 1248 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 SCUBE3Q8IX30 993 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 IQCKQ8N0W5 287 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 TSEN2Q8NCE0 465 aaKnown RBP12.56□□□□□ -0.4
TPM3-202ENST00000302206 BBOF1Q8ND07 529 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 LINC01599Q8WXQ3 324 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 APBB2Q92870 758 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PIWIL1Q96J94 861 aaKnown RBP12.56□□□□□ -0.4
TPM3-202ENST00000302206 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 FMO2Q99518 471 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 B3GNT5Q9BYG0 378 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 NEUROG2Q9H2A3 272 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 TMEM161AQ9NX61 479 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 R3HDM2Q9Y2K5 976 aaKnown RBP12.56□□□□□ -0.4
TPM3-202ENST00000302206 NEU2Q9Y3R4 380 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 DNAH12Q6ZR08 3092 aa12.56□□□□□ -0.4
TPM3-202ENST00000302206 H3BQF6 201 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 MDM4O15151 490 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 PPFIA2O75334 1257 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 DAB1O75553 588 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 B3GAT3O94766 335 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 ITGAVP06756 1048 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 KRT10P13645 584 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 ITIH2P19823 946 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 IGFBP6P24592 240 aaPredicted RBP12.55□□□□□ -0.4
TPM3-202ENST00000302206 RPL21P46778 160 aaKnown RBP12.55□□□□□ -0.4
TPM3-202ENST00000302206 KCNJ1P48048 391 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 KRT17Q04695 432 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 MAPRE1Q15691 268 aaKnown RBP12.55□□□□□ -0.4
TPM3-202ENST00000302206 PLEKHG4Q58EX7 1191 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 NOMO2Q5JPE7 1267 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 CFAP58Q5T655 872 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 FAM171BQ6P995 826 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 ZDHHC24Q6UX98 284 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 CLEC20AQ6ZU45 233 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 CYP4V2Q6ZWL3 525 aaPredicted RBP12.55□□□□□ -0.4
TPM3-202ENST00000302206 STRADAQ7RTN6 431 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 TMC3Q7Z5M5 1100 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 FAM35AQ86V20 835 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 MAP7D3Q8IWC1 876 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 SCML4Q8N228 414 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 ART4Q93070 314 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms