RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MYCBPAPQ8TBZ2 947 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 RSPH1Q8WYR4 309 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 PCED1BQ96HM7 432 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 DEFB118Q96PH6 123 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 ADAM33Q9BZ11 813 aa23.33■■□□□ 1.33
SMAD1-201ENST00000302085 NGRNQ9NPE2 291 aaKnown RBP23.33■■□□□ 1.33
SMAD1-201ENST00000302085 DDHD2O94830 711 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 GAS8O95995 478 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 FAM200BP0CF97 657 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 MAP3K7CLP57077 242 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 DHX9Q08211 1270 aaKnown RBP23.32■■□□□ 1.32
SMAD1-201ENST00000302085 ADIGQ0VDE8 80 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 BBS12Q6ZW61 710 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 CENPIQ92674 756 aaPredicted RBP23.32■■□□□ 1.32
SMAD1-201ENST00000302085 SMOQ99835 787 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 DDX23Q9BUQ8 820 aaKnown RBP23.32■■□□□ 1.32
SMAD1-201ENST00000302085 KRT82Q9NSB4 513 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 TP73O15350 636 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 CST8O60676 142 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 PPFIA2O75334 1257 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 PAX3P23760 479 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 PCSK1P29120 753 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 NDUFV1P49821 464 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 RABGGTBP53611 331 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 HDAC4P56524 1084 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 BYSLQ13895 437 aaKnown RBP23.32■■□□□ 1.32
SMAD1-201ENST00000302085 EFHC1Q5JVL4 640 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 SCYL2Q6P3W7 929 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 FAM35AQ86V20 835 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 METTL23Q86XA0 190 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 SPATA18Q8TC71 538 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 HAUS1Q96CS2 278 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 SH3GL2Q99962 352 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 WHRNQ9P202 907 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 ASIC3Q9UHC3 531 aa23.32■■□□□ 1.32
SMAD1-201ENST00000302085 DRG1Q9Y295 367 aaKnown RBP23.32■■□□□ 1.32
SMAD1-201ENST00000302085 DYNLT1P63172 113 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 BFSP2Q13515 415 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 BOLA3Q53S33 107 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 NOMO2Q5JPE7 1267 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 ACBD6Q9BR61 282 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 FTHL17Q9BXU8 183 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMAD1-201ENST00000302085 TMEM30AQ9NV96 361 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 SAE1Q9UBE0 346 aaPredicted RBP23.31■■□□□ 1.32
SMAD1-201ENST00000302085 FAN1Q9Y2M0 1017 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 AP1G2O75843 785 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 CACNA2D1P54289 1103 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 CDH6P55285 790 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 MRPS5P82675 430 aaKnown RBP23.31■■□□□ 1.32
SMAD1-201ENST00000302085 DSC1Q08554 894 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 MMRN1Q13201 1228 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 FAM171BQ6P995 826 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 PRUNE1Q86TP1 453 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 ZMIZ2Q8NF64 920 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 NKD2Q969F2 451 aaPredicted RBP23.31■■□□□ 1.32
SMAD1-201ENST00000302085 SUSD3Q96L08 255 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 KCNK16Q96T55 309 aa23.31■■□□□ 1.32
SMAD1-201ENST00000302085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMAD1-201ENST00000302085 ENPP3O14638 875 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 ITIH2P19823 946 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 KLRC2P26717 231 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 VCPP55072 806 aaKnown RBP23.3■■□□□ 1.32
SMAD1-201ENST00000302085 RFX6Q8HWS3 928 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 SLC35B2Q8TB61 432 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 TEKT4Q8WW24 435 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 CALN1Q9BXU9 219 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 LRRC4Q9HBW1 653 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 GPATCH2LQ9NWQ4 482 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 DSEQ9UL01 958 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 ZNF148Q9UQR1 794 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 PLAAQ9Y263 795 aa23.3■■□□□ 1.32
SMAD1-201ENST00000302085 KRT14P02533 472 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 GYS2P54840 703 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 LMNB2Q03252 620 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 DPYSL3Q14195 570 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 OASLQ15646 514 aaKnown RBP23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ZC3H12AQ5D1E8 599 aaKnown RBP23.29■■□□□ 1.32
SMAD1-201ENST00000302085 COLGALT2Q8IYK4 626 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 DBF4BQ8NFT6 615 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 SNF8Q96H20 258 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 PKMYT1Q99640 499 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 NCAPGQ9BPX3 1015 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 OGDHLQ9ULD0 1010 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ATP8A1Q9Y2Q0 1164 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 H0YGN5 161 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 RNF40O75150 1001 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 CCL5P13501 91 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ADCY8P40145 1251 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 MATKP42679 507 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 TKTL1P51854 596 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ATXN1P54253 815 aaKnown RBP23.29■■□□□ 1.32
SMAD1-201ENST00000302085 CALCOCO2Q13137 446 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 PLEKHG4Q58EX7 1191 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 INTS6LQ5JSJ4 861 aaKnown RBP23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ZNF365Q70YC5 407 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 GSTA5Q7RTV2 222 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 DEFB106AQ8N104 65 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ALLCQ8N6M5 410 aa23.29■■□□□ 1.32
SMAD1-201ENST00000302085 ACTL9Q8TC94 416 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms