RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DYDC1Q8WWB3 177 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 NMRK2Q9NPI5 230 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 RRN3P2A6NIE6 340 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 SPTLC1O15269 473 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 GABBR2O75899 941 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 NQO1P15559 274 aaKnown RBP22.94■■□□□ 1.26
TPM4-201ENST00000300933 TFE3P19532 575 aaPredicted RBP22.94■■□□□ 1.26
TPM4-201ENST00000300933 SOWAHAQ2M3V2 549 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 MORN1Q5T089 497 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 NOTUMQ6P988 496 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 ZC3H18Q86VM9 953 aaKnown RBP22.94■■□□□ 1.26
TPM4-201ENST00000300933 ZNF570Q96NI8 536 aa22.94■■□□□ 1.26
TPM4-201ENST00000300933 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.94■■□□□ 1.26
TPM4-201ENST00000300933 CCDC130P13994 396 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 ADORA2BP29275 332 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 LCLAT1Q6UWP7 414 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 NGRNQ9NPE2 291 aaKnown RBP22.93■■□□□ 1.26
TPM4-201ENST00000300933 CFAP73A6NFT4 308 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 KRT7P08729 469 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 NCALDP61601 193 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 CCDC33Q8N5R6 958 aa22.93■■□□□ 1.26
TPM4-201ENST00000300933 A8MXQ7 604 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 TRUB2O95900 331 aaKnown RBP22.92■■□□□ 1.26
TPM4-201ENST00000300933 CDH6P55285 790 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 SOX4Q06945 474 aaPredicted RBP22.92■■□□□ 1.26
TPM4-201ENST00000300933 RIPK1Q13546 671 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 SNX17Q15036 470 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 UNC45BQ8IWX7 931 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 FGFR1OP2Q9NVK5 253 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 NOP53Q9NZM5 478 aaKnown RBP22.92■■□□□ 1.26
TPM4-201ENST00000300933 FGFR1P11362 822 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 MAGEA4P43358 317 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 PSEN2P49810 448 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 ATXN1P54253 815 aaKnown RBP22.92■■□□□ 1.26
TPM4-201ENST00000300933 FKBP1BP68106 108 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 DCAF4L1Q3SXM0 396 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 ZC3H12AQ5D1E8 599 aaKnown RBP22.92■■□□□ 1.26
TPM4-201ENST00000300933 ANKMY2Q8IV38 441 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 ARRDC4Q8NCT1 418 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 MICAL1Q8TDZ2 1067 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 WDR35Q9P2L0 1181 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 TRIM33Q9UPN9 1127 aa22.92■■□□□ 1.26
TPM4-201ENST00000300933 MYADML2A6NDP7 307 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 MEIS3P2A8K0S8 358 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 DNALI1O14645 258 aaPredicted RBP22.91■■□□□ 1.26
TPM4-201ENST00000300933 SNX3O60493 162 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 GABRB2P47870 512 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 ANKRD22Q5VYY1 191 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 C9orf57Q5W0N0 161 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 FAM71DQ8N9W8 422 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 NDRG1Q92597 394 aaKnown RBP22.91■■□□□ 1.26
TPM4-201ENST00000300933 ARHGEF2Q92974 986 aaKnown RBP22.91■■□□□ 1.26
TPM4-201ENST00000300933 NSRP1Q9H0G5 558 aaKnown RBP22.91■■□□□ 1.26
TPM4-201ENST00000300933 ZSWIM8A7E2V4 1837 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 SMIM28A0A1B0GU29 152 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 KRT16P08779 473 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 GPD1P21695 349 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 COPS2P61201 443 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 ZBTB6Q15916 424 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 KYAT1Q16773 422 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 C1orf228Q6PIY5 440 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 POLNQ7Z5Q5 900 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 SLC35B2Q8TB61 432 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 KLHL29Q96CT2 875 aa22.91■■□□□ 1.26
TPM4-201ENST00000300933 C2CD4BA6NLJ0 364 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 TCP11X1B4DZS4 312 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 ZNF143P52747 638 aaPredicted RBP22.9■■□□□ 1.26
TPM4-201ENST00000300933 ZFP42Q96MM3 310 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 TCRBV7S3A2A0A539 114 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 UNCXA6NJT0 531 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 AGTP01019 485 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 CCDC14Q49A88 953 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 CYP4V2Q6ZWL3 525 aaPredicted RBP22.9■■□□□ 1.26
TPM4-201ENST00000300933 ANKRD42Q8N9B4 389 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 BEST2Q8NFU1 509 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 FNIP1Q8TF40 1166 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 KIF9Q9HAQ2 790 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 KCNK9Q9NPC2 374 aa22.9■■□□□ 1.26
TPM4-201ENST00000300933 SMIM35A0A1B0GVV1 85 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 MBLAC1A4D2B0 266 aaPredicted RBP22.89■■□□□ 1.26
TPM4-201ENST00000300933 LCP1P13796 627 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 RABGGTBP53611 331 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 CAV1Q03135 178 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 LMNB2Q03252 620 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 ZBED8Q8IZ13 594 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 CCHCR1Q8TD31 782 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 ASNSD1Q9NWL6 643 aa22.89■■□□□ 1.26
TPM4-201ENST00000300933 AFF1P51825 1210 aaKnown RBP22.89■■□□□ 1.25
TPM4-201ENST00000300933 CA9Q16790 459 aa22.89■■□□□ 1.25
TPM4-201ENST00000300933 ZCCHC9Q8N567 271 aaKnown RBP22.89■■□□□ 1.25
TPM4-201ENST00000300933 CMASQ8NFW8 434 aaPredicted RBP22.89■■□□□ 1.25
TPM4-201ENST00000300933 SPATA18Q8TC71 538 aa22.89■■□□□ 1.25
TPM4-201ENST00000300933 POC1B-GALNT4F8VUJ3 575 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 PAPSS1O43252 624 aaPredicted RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 ZKSCAN8Q15776 578 aaPredicted RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 ALKAL1Q6UXT8 129 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 RSAD2Q8WXG1 361 aa22.88■■□□□ 1.25
TPM4-201ENST00000300933 KHSRPQ92945 711 aaKnown RBP eCLIP22.88■■□□□ 1.25
TPM4-201ENST00000300933 NKD2Q969F2 451 aaPredicted RBP22.88■■□□□ 1.25
TPM4-201ENST00000300933 USP15Q9Y4E8 981 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms