RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 MYH14Q7Z406 1995 aaKnown RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 ROBO1Q9Y6N7 1651 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 POLR2MP0CAP2 368 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CPOXP36551 454 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CEP55Q53EZ4 464 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CYP4A22Q5TCH4 519 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 MAP3K21Q5TCX8 1036 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 KLHL35Q6PF15 583 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 ERLEC1Q96DZ1 483 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 DCUN1D1Q96GG9 259 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 TEKT3Q9BXF9 490 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 APOBEC2Q9Y235 224 aaKnown RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 NDC80O14777 642 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CFLARO15519 480 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 TBC1D12O60347 775 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 TFPTP0C1Z6 253 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 KCNA4P22459 653 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 SERPINB8P50452 374 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 GPC3P51654 580 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 RPL10AP62906 217 aaKnown RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 PLOD1Q02809 727 aaPredicted RBP11.42□□□□□ -0.58
SNX20-201ENST00000300590 HSP90AA5PQ58FG0 334 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 TFDP3Q5H9I0 405 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 ZNF554Q86TJ5 538 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 ZBTB46Q86UZ6 589 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 TRIM11Q96F44 468 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 ANLNQ9NQW6 1124 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 MAN1C1Q9NR34 630 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 CDH22Q9UJ99 828 aa11.42□□□□□ -0.58
SNX20-201ENST00000300590 hCG_1818297A0A087WSY0 165 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 ITM2AO43736 263 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 ATP9BO43861 1147 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 SLC5A2P31639 672 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 STT3AP46977 705 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 PSMD7P51665 324 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 MRPS22P82650 360 aaKnown RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 TBL3Q12788 808 aaKnown RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 GRAPQ13588 217 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 AAGABQ6PD74 315 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 CNTN3Q9P232 1028 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 HBS1LQ9Y450 684 aaKnown RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 HNRNPDLO14979 420 aaKnown RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 TRMUO75648 421 aaKnown RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 CD48P09326 243 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 OGDHQ02218 1023 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 ITGA9Q13797 1035 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 KRT81Q14533 505 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 WDR75Q8IWA0 830 aaKnown RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 NAT8LQ8N9F0 302 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 NAV1Q8NEY1 1877 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 RIN3Q8TB24 985 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 SLC44A1Q8WWI5 657 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 STRA6Q9BX79 667 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 CALN1Q9BXU9 219 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 SHANK3Q9BYB0 1731 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 COPS7BQ9H9Q2 264 aaPredicted RBP11.41□□□□□ -0.58
SNX20-201ENST00000300590 PPCSQ9HAB8 311 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 DNAJB4Q9UDY4 337 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 ZNRF3Q9ULT6 936 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 PLLPQ9Y342 182 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 AP4B1Q9Y6B7 739 aa11.41□□□□□ -0.58
SNX20-201ENST00000300590 F5H423 210 aaPredicted RBP11.4□□□□□ -0.58
SNX20-201ENST00000300590 AIM2O14862 343 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 SERPINA6P08185 405 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 NOMO3P69849 1222 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 GRM2Q14416 872 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 DOK7Q18PE1 504 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 DNAJC24Q6P3W2 148 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 RFX6Q8HWS3 928 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 TRIML2Q8N7C3 387 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 TMIGD2Q96BF3 282 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 LRGUKQ96M69 825 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 XAB2Q9HCS7 855 aaKnown RBP11.4□□□□□ -0.58
SNX20-201ENST00000300590 PARVAQ9NVD7 372 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
SNX20-201ENST00000300590 DCXO43602 365 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 DNAJA2O60884 412 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 DGKIO75912 1065 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 KRT37O76014 449 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 TCN1P20061 433 aaPredicted RBP11.4□□□□□ -0.58
SNX20-201ENST00000300590 GMPRP36959 345 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 ACOT2P49753 483 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 MRPS5P82675 430 aaKnown RBP11.4□□□□□ -0.58
SNX20-201ENST00000300590 PTP4A2Q12974 167 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 PCGF5Q86SE9 256 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 DHRS4Q9BTZ2 278 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 PFDN4Q9NQP4 134 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 PNPOQ9NVS9 261 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 ZDHHC7Q9NXF8 308 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms