RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CSNK1G1Q9HCP0 422 aa16.46■□□□□ 0.22
HERPUD1-201ENST00000300302 NGRNQ9NPE2 291 aaKnown RBP16.46■□□□□ 0.22
HERPUD1-201ENST00000300302 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.222e-11■■■■□ 20.8
HERPUD1-201ENST00000300302 FEZ2Q9UHY8 353 aaPredicted RBP16.46■□□□□ 0.22
HERPUD1-201ENST00000300302 ADAM28Q9UKQ2 775 aa16.46■□□□□ 0.22
HERPUD1-201ENST00000300302 EFR3BQ9Y2G0 817 aa16.46■□□□□ 0.22
HERPUD1-201ENST00000300302 TTC3P53804 2025 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 ZSCAN5CA6NGD5 496 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 NRP1O14786 923 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 OAZ2O95190 189 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 CDKN2BP42772 138 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 TKTL1P51854 596 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 BOLA3Q53S33 107 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 KCNT1Q5JUK3 1230 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 KCTD6Q8NC69 237 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 OR10T2Q8NGX3 314 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 FAM149B1Q96BN6 582 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 CNGB3Q9NQW8 809 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 FAN1Q9Y2M0 1017 aa16.45■□□□□ 0.22
HERPUD1-201ENST00000300302 ESYT3A0FGR9 886 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 TBKBP1A7MCY6 615 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 MYBL2P10244 700 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 KDELR1P24390 212 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 MATKP42679 507 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 GATMP50440 423 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 YWHAZP63104 245 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 ADCY1Q08828 1119 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 CCNG2Q16589 344 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 SH3PXD2AQ5TCZ1 1133 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 KAZNQ674X7 775 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 EMBQ6PCB8 327 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 JAMLQ86YT9 394 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 SPATA2LQ8IUW3 424 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 DCP1BQ8IZD4 617 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 LRRC43Q8N309 656 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 TET1Q8NFU7 2136 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 CMASQ8NFW8 434 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 GRK7Q8WTQ7 553 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 CASKIN2Q8WXE0 1202 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 ACSF2Q96CM8 615 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 KCNK16Q96T55 309 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 TBCBQ99426 244 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 DDX23Q9BUQ8 820 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 FAM114A2Q9NRY5 505 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 hCG_1818297A0A087WSY0 165 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 BDNFP23560 247 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 CARSP49589 748 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 RAB41Q5JT25 222 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 SCYL2Q6P3W7 929 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 TTC27Q6P3X3 843 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 GSPT2Q8IYD1 628 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 AENQ8WTP8 325 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 TEKT4Q8WW24 435 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 C1orf54Q8WWF1 131 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 SEC14L1Q92503 715 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 HSPH1Q92598 858 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 ERP44Q9BS26 406 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 HERPUD2Q9BSE4 406 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 FUT8Q9BYC5 575 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 DCLK3Q9C098 648 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 PNPLA8Q9NP80 782 aa16.44■□□□□ 0.22
HERPUD1-201ENST00000300302 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 BHMG1C9JSJ3 638 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 DAB1O75553 588 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 ECEL1O95672 775 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 KRT10P13645 584 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 PTGIRP43119 386 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 TNNT3P45378 269 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 CDR1P51861 262 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 NECAB2Q7Z6G3 386 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 ANKS1BQ7Z6G8 1248 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 LRRTM3Q86VH5 581 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 MAP7D3Q8IWC1 876 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 CENPIQ92674 756 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 TMEM209Q96SK2 561 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 TMLHEQ9NVH6 421 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 STAP1Q9ULZ2 295 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 NFU1Q9UMS0 254 aa16.43■□□□□ 0.22
HERPUD1-201ENST00000300302 EN2P19622 333 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 NOS2P35228 1153 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 SLC11A1P49279 550 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 NDUFV1P49821 464 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 CACNA2D1P54289 1103 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 LMNB2Q03252 620 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 SNX1Q13596 522 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 HLTFQ14527 1009 aaKnown RBP eCLIP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 SLC25A52Q3SY17 297 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 FAM171A1Q5VUB5 890 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 SYDE1Q6ZW31 735 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 STRADAQ7RTN6 431 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 ATL2Q8NHH9 583 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 PEBP4Q96S96 227 aa16.42■□□□□ 0.22
HERPUD1-201ENST00000300302 TRIM51Q9BSJ1 452 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms