RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 SEL1LQ9UBV2 794 aa17.34■□□□□ 0.37
SBSPON-201ENST00000297354 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
SBSPON-201ENST00000297354 COL1A1P02452 1464 aaPredicted RBP17.33■□□□□ 0.37
SBSPON-201ENST00000297354 ALOX15BO15296 676 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 EDIL3O43854 480 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 OCM2P0CE71 109 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 OCMP0CE72 109 aaPredicted RBP17.33■□□□□ 0.37
SBSPON-201ENST00000297354 PCYT1AP49585 367 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 MTTPP55157 894 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 GPX6P59796 221 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 TFAMQ00059 246 aaKnown RBP17.33■□□□□ 0.37
SBSPON-201ENST00000297354 PRKG1Q13976 671 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 NPNTQ6UXI9 565 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 CMTM5Q96DZ9 223 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 KCNK16Q96T55 309 aa17.33■□□□□ 0.37
SBSPON-201ENST00000297354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 TYROBPO43914 113 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 TNFAIP8O95379 198 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 VIL1P09327 827 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 ZFXP17010 805 aaPredicted RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 RPL22P35268 128 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 CDHR3Q6ZTQ4 885 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 NOCTQ9UK39 431 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 MEIS2O14770 477 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 DLDP09622 509 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 GTF2H1P32780 548 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 CSE1LP55060 971 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 SFSWAPQ12872 951 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 CARTPTQ16568 116 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 TTC39BQ5VTQ0 682 aaPredicted RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 EXD1Q8NHP7 514 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 FAM172AQ8WUF8 416 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 VTI1AQ96AJ9 217 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 HAUS8Q9BT25 410 aa17.33■□□□□ 0.36
SBSPON-201ENST00000297354 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
SBSPON-201ENST00000297354 HLA-DRAP01903 254 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 TFDP3Q5H9I0 405 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 DPY19L2Q6NUT2 758 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 CES3Q6UWW8 571 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 UNC45BQ8IWX7 931 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 RBM12BQ8IXT5 1001 aaKnown RBP17.32■□□□□ 0.36
SBSPON-201ENST00000297354 NETO2Q8NC67 525 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 ZFP28Q8NHY6 868 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 WDR11Q9BZH6 1224 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 DHX35Q9H5Z1 703 aaKnown RBP17.32■□□□□ 0.36
SBSPON-201ENST00000297354 IL1RL2Q9HB29 575 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 TRNAU1APQ9NX07 287 aaKnown RBP17.32■□□□□ 0.36
SBSPON-201ENST00000297354 KCNK4Q9NYG8 393 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 EPS15L1Q9UBC2 864 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 PDGFRBP09619 1106 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 GRIA2P42262 883 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 ENTPD1P49961 510 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 FASTKD5Q7L8L6 764 aaKnown RBP17.32■□□□□ 0.36
SBSPON-201ENST00000297354 STKLD1Q8NE28 680 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 FERMT1Q9BQL6 677 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 C1orf232A0A0U1RR37 186 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 KLHL2O95198 593 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 ROR1Q01973 937 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 SPDYAQ5MJ70 313 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 ZNF398Q8TD17 642 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 CYGBQ8WWM9 190 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 FOXP3Q9BZS1 431 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 ACSS3Q9H6R3 686 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 GPATCH2LQ9NWQ4 482 aa17.32■□□□□ 0.36
SBSPON-201ENST00000297354 NDUFB10O96000 172 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 ABHD2P08910 425 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 DSG3P32926 999 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 GMPRP36959 345 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 TNFAIP8L3Q5GJ75 292 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 MYO1HQ8N1T3 1032 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 BANPQ8N9N5 519 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 DDHD1Q8NEL9 900 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 BHLHE22Q8NFJ8 381 aaPredicted RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 PTTG2Q9NZH5 202 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SHOC2Q9UQ13 582 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 POMPQ9Y244 141 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 AKAP10O43572 662 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 EEF1DP29692 281 aaKnown RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 MAGEA8P43361 318 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SLC5A3P53794 718 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SLC26A11Q86WA9 606 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 TSPAN14Q8NG11 270 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SHC3Q92529 594 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 CD101Q93033 1021 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 DDX4Q9NQI0 724 aaKnown RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 STK24Q9Y6E0 443 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 MAGEC1O60732 1142 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 ALOX15P16050 662 aaPredicted RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 TFE3P19532 575 aaPredicted RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 NEDD8Q15843 81 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 MYLK3Q32MK0 819 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 LDLRAP1Q5SW96 308 aa17.31■□□□□ 0.36
SBSPON-201ENST00000297354 N4BP2L1Q5TBK1 243 aaPredicted RBP17.31■□□□□ 0.36
SBSPON-201ENST00000297354 PDSS2Q86YH6 399 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms