RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SSU72Q9NP77 194 aaKnown RBP15.32■□□□□ 0.04
CCNF-201ENST00000293968 RIPK3Q9Y572 518 aa15.32■□□□□ 0.04
CCNF-201ENST00000293968 A0A0B4J269 797 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 YDJCA8MPS7 323 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 ZBED1O96006 694 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 PPP6R3Q5H9R7 873 aaPredicted RBP15.31■□□□□ 0.04
CCNF-201ENST00000293968 SLC44A1Q8WWI5 657 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 STRIP2Q9ULQ0 834 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 STRCQ7RTU9 1775 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 CXorf49A8MYA2 514 aaPredicted RBP15.31■□□□□ 0.04
CCNF-201ENST00000293968 LYNP07948 512 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 MIPP30301 263 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 STX3Q13277 289 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 HIC1Q14526 733 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 GRAMD1BQ3KR37 738 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 C16orf46Q6P387 395 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 BBS12Q6ZW61 710 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 TUBGCP5Q96RT8 1024 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 ADPGKQ9BRR6 497 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 PDP2Q9P2J9 529 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 PPM1HQ9ULR3 514 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 BTAF1O14981 1849 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 ASPHQ12797 758 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 CUL3Q13618 768 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 C11orf91Q3C1V1 193 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 TRIM42Q8IWZ5 723 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 DEPDC1BQ8WUY9 529 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 EBF4Q9BQW3 602 aa15.31■□□□□ 0.04
CCNF-201ENST00000293968 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
CCNF-201ENST00000293968 G3BP2Q9UN86 482 aaKnown RBP15.31■□□□□ 0.04
CCNF-201ENST00000293968 A8MXQ7 604 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 OSBPP22059 807 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 TAP1Q03518 808 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 UBA3Q8TBC4 463 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 PANX3Q96QZ0 392 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 PIH1D1Q9NWS0 290 aaKnown RBP15.3■□□□□ 0.04
CCNF-201ENST00000293968 LYPLA1O75608 230 aaPredicted RBP15.3■□□□□ 0.04
CCNF-201ENST00000293968 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
CCNF-201ENST00000293968 LAMB3Q13751 1172 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 KRT72Q14CN4 511 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 WDR78Q5VTH9 848 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 OR6B2Q6IFH4 312 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 TMEM174Q8WUU8 243 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 WNK4Q96J92 1243 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 MMP19Q99542 508 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 SLC7A8Q9UHI5 535 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 SYNPO2Q9UMS6 1093 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 STK10O94804 968 aaKnown RBP15.3■□□□□ 0.04
CCNF-201ENST00000293968 ZNF276Q8N554 614 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 ECSITQ9BQ95 431 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 ZNF302Q9NR11 478 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 USP18Q9UMW8 372 aa15.3■□□□□ 0.04
CCNF-201ENST00000293968 M0QYV0 167 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 WDR46O15213 610 aaKnown RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 KRT38O76015 456 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 DUOXA2Q1HG44 320 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 SH3PXD2AQ5TCZ1 1133 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 LPCAT4Q643R3 524 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 EEPD1Q7L9B9 569 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 ST13P4Q8IZP2 240 aaPredicted RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 TMEM130Q8N3G9 435 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 SLC38A10Q9HBR0 1119 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 KCNK4Q9NYG8 393 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 PACSIN3Q9UKS6 424 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 SMAPO00193 183 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 RPL10AP62906 217 aaKnown RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 TRMT5Q32P41 509 aaKnown RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 DNAL1Q4LDG9 190 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 FOXB2Q5VYV0 432 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 WDTC1Q8N5D0 677 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 CENPKQ9BS16 269 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 ASB3Q9Y575 518 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 PRPSAP2O60256 369 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 LSM8O95777 96 aaKnown RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 RANBP1P43487 201 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 YWHAEP62258 255 aaKnown RBP15.29■□□□□ 0.04
CCNF-201ENST00000293968 PEX6Q13608 980 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 POLNQ7Z5Q5 900 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 KIAA0319LQ8IZA0 1049 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 TTLL6Q8N841 843 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 MZB1Q8WU39 189 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 IRAK4Q9NWZ3 460 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 TAF1LQ8IZX4 1826 aa15.29■□□□□ 0.04
CCNF-201ENST00000293968 SIGLEC16A6NMB1 481 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 DNAJC6O75061 913 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 ZMPSTE24O75844 475 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 TNNC2P02585 160 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 KCNA4P22459 653 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 TRIP10Q15642 601 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 DENND5BQ6ZUT9 1274 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 RAPH1Q70E73 1250 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 CHSY1Q86X52 802 aa15.28■□□□□ 0.04
CCNF-201ENST00000293968 APLFQ8IW19 511 aaPredicted RBP15.28■□□□□ 0.04
CCNF-201ENST00000293968 WDR75Q8IWA0 830 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms