RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TCRBV7S2A1N4TA0A589 114 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 RGS16O15492 202 aaPredicted RBP17.61■□□□□ 0.41
CPSF4-201ENST00000292476 HOXA2O43364 376 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 GAS8O95995 478 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 GPD2P43304 727 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 CLCNKBP51801 687 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 SLC8A3P57103 927 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 SLC29A2Q14542 456 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 PPP1R7Q15435 360 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 ERMARDQ5T6L9 678 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 ACOT1Q86TX2 421 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 TMEM199Q8N511 208 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 WDTC1Q8N5D0 677 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 STK32AQ8WU08 396 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 KBTBD7Q8WVZ9 684 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 RAPGEF5Q92565 580 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 SENP8Q96LD8 212 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 CCDC134Q9H6E4 229 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 PPANQ9NQ55 473 aaKnown RBP17.61■□□□□ 0.41
CPSF4-201ENST00000292476 IP6K2Q9UHH9 426 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 TSPAN16Q9UKR8 245 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 POMCP01189 267 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 SHBGP04278 402 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 ACRP10323 421 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 ODC1P11926 461 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 SCN1AP35498 2009 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 GABRB2P47870 512 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 SKIDA1Q1XH10 827 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 C9orf50Q5SZB4 431 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 DCUN1D2Q6PH85 259 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 RHBDF2Q6PJF5 856 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 DCLRE1AQ6PJP8 1040 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 CEP128Q6ZU80 1094 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 RTN4RL1Q86UN2 441 aaPredicted RBP17.6■□□□□ 0.41
CPSF4-201ENST00000292476 METTL23Q86XA0 190 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 BBOF1Q8ND07 529 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 SNF8Q96H20 258 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 XPO6Q96QU8 1125 aaKnown RBP17.6■□□□□ 0.41
CPSF4-201ENST00000292476 CHORDC1Q9UHD1 332 aaPredicted RBP17.6■□□□□ 0.41
CPSF4-201ENST00000292476 PCDHB7Q9Y5E2 793 aa17.6■□□□□ 0.41
CPSF4-201ENST00000292476 SCN5AQ14524 2016 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 GABRDO14764 452 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 NBNO60934 754 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 SSTR3P32745 418 aaPredicted RBP17.59■□□□□ 0.41
CPSF4-201ENST00000292476 KRT17Q04695 432 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 ORC1Q13415 861 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 NOMO2Q5JPE7 1267 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 TAOK1Q7L7X3 1001 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 RHOT1Q8IXI2 618 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 KATNAL2Q8IYT4 538 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 ABI1Q8IZP0 508 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 FOXP3Q9BZS1 431 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 DCLK3Q9C098 648 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 SEMA4AQ9H3S1 761 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 ACTR5Q9H9F9 607 aaPredicted RBP17.59■□□□□ 0.41
CPSF4-201ENST00000292476 CYLDQ9NQC7 956 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 TMEM51Q9NW97 253 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 INPP5FQ9Y2H2 1132 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 LAMA3Q16787 3333 aa17.59■□□□□ 0.41
CPSF4-201ENST00000292476 ENPP3O14638 875 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 B3GAT3O94766 335 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 ATP5DP30049 168 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 PIGHQ14442 188 aaPredicted RBP17.58■□□□□ 0.41
CPSF4-201ENST00000292476 SHHQ15465 462 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 GOLGA7BQ2TAP0 167 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.41
CPSF4-201ENST00000292476 TAX1BP1Q86VP1 789 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 CPNE8Q86YQ8 564 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 ZDHHC17Q8IUH5 632 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 ANKRD52Q8NB46 1076 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 DBF4BQ8NFT6 615 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 ATL2Q8NHH9 583 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 FAM193BQ96PV7 902 aaPredicted RBP17.58■□□□□ 0.41
CPSF4-201ENST00000292476 LRFN2Q9ULH4 789 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.41
CPSF4-201ENST00000292476 TMEM191CA6NGB0 347 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 CASTOR2A6NHX0 329 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 SIGLEC16A6NMB1 481 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 ANKRD65E5RJM6 399 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 RASGRF2O14827 1237 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 TCEA3O75764 348 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 CXCL10P02778 98 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 PCSK1P29120 753 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 RFC2P35250 354 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 BCAT1P54687 386 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 PSMC1P62191 440 aaKnown RBP17.58■□□□□ 0.4
CPSF4-201ENST00000292476 BST2Q10589 180 aaKnown RBP17.58■□□□□ 0.4
CPSF4-201ENST00000292476 KLF1Q13351 362 aaPredicted RBP17.58■□□□□ 0.4
CPSF4-201ENST00000292476 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■□□□□ 10.7
CPSF4-201ENST00000292476 CCNG2Q16589 344 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 PTPN20Q4JDL3 420 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 CACNA2D3Q8IZS8 1091 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 B3GALNT2Q8NCR0 500 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 EXD1Q8NHP7 514 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 CHMP6Q96FZ7 201 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 SERPINB12Q96P63 405 aa17.58■□□□□ 0.4
CPSF4-201ENST00000292476 A0A1W2PPC1 479 aa17.57■□□□□ 0.4
CPSF4-201ENST00000292476 FAM170AA1A519 330 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms