RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CALB2P22676 271 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 TALDO1P37837 337 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 CRKP46108 304 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 RBP5P82980 135 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 SNRNP35Q16560 246 aaKnown RBP11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 CDH24Q86UP0 819 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 MAGEB18Q96M61 343 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 CEP44Q9C0F1 390 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 TDRD3Q9H7E2 651 aaKnown RBP11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 TUFT1Q9NNX1 390 aa11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 CHORDC1Q9UHD1 332 aaPredicted RBP11.11□□□□□ -0.63
PKNOX1-201ENST00000291547 BCL9LQ86UU0 1499 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 BCL10O95999 233 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 ATP6V1B2P21281 511 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 GRIK1P39086 918 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 SERPINB8P50452 374 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 ALDH6A1Q02252 535 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 PPIDQ08752 370 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 MAPK7Q13164 816 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 MTDHQ86UE4 582 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 TRIM63Q969Q1 353 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 CLEC4MQ9H2X3 399 aaPredicted RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 DKK3Q9UBP4 350 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 TUBGCP4Q9UGJ1 667 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 COMMD3-BMI1R4GMX3 469 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 ADGRA3Q8IWK6 1321 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 GSG1L2A8MUP6 293 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 UBXN8O00124 270 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 ASNA1O43681 348 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 TRIM13O60858 407 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 FKBP6O75344 327 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 CAPN1P07384 714 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 HMBSP08397 361 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 FNTAP49354 379 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 PEX5P50542 639 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 MAPK11Q15759 364 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 NDUFA5Q16718 116 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 EDRF1Q3B7T1 1238 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 IL31Q6EBC2 164 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 RNFT2Q96EX2 444 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 SPATA33Q96N06 139 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 REEP2Q9BRK0 252 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 BTBD7Q9P203 1132 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 O00370 1275 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 GLRA3O75311 464 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 CCDC166P0CW27 439 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 KLK7P49862 253 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 AQP5P55064 265 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 TWF1Q12792 350 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 KYAT1Q16773 422 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 FAXCQ5TGI0 409 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 NAPEPLDQ6IQ20 393 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 STYK1Q6J9G0 422 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 C11orf88Q6PI97 169 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 OTOAQ7RTW8 1153 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 DCUN1D5Q9BTE7 237 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 NOL6Q9H6R4 1146 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 LRCH1Q9Y2L9 728 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 A0A0G2JLW4 131 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 MYMKA6NI61 221 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 POLRMTO00411 1230 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 PSMB9P28065 219 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 ATP12AP54707 1039 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 RAD23AP54725 363 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 RPS7P62081 194 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 DDX39BQ13838 428 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 USP49Q70CQ1 688 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 NANOGNBQ7Z5D8 188 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 SRBD1Q8N5C6 995 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 YIPF2Q9BWQ6 316 aa11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 DDX18Q9NVP1 670 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.635e-12■■■■□ 22.7
PKNOX1-201ENST00000291547 EIF3LQ9Y262 564 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-201ENST00000291547 A0A1W2PQJ5 194 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 COQ9O75208 318 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 PDGFRBP09619 1106 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM58BPP0C7Q3 252 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 XRCC4Q13426 336 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 CYP51A1Q16850 503 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TAF2Q6P1X5 1199 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 ANKRD23Q86SG2 305 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 SPATA2LQ8IUW3 424 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 SLC44A2Q8IWA5 706 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 PPP2R3CQ969Q6 453 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RPS6KL1Q9Y6S9 549 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RGPD2P0DJD1 1756 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 HEATR9A2RTY3 570 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms