RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SIX6OS1Q8N1H7 587 aa16.55■□□□□ 0.24
SMAD6-201ENST00000288840 C12orf50Q8NA57 414 aaPredicted RBP16.55■□□□□ 0.24
SMAD6-201ENST00000288840 USP33Q8TEY7 942 aa16.55■□□□□ 0.24
SMAD6-201ENST00000288840 CPT1BQ92523 772 aa16.55■□□□□ 0.24
SMAD6-201ENST00000288840 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
SMAD6-201ENST00000288840 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
SMAD6-201ENST00000288840 WDR35Q9P2L0 1181 aa16.55■□□□□ 0.24
SMAD6-201ENST00000288840 PIN4Q9Y237 131 aaKnown RBP16.55■□□□□ 0.24
SMAD6-201ENST00000288840 SRRM3A6NNA2 597 aaPredicted RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 DYNC1LI2O43237 492 aaPredicted RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 EIF4BP23588 611 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 SNX16P57768 344 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 RCN1Q15293 331 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 ZPBP2Q6X784 338 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 NDRG1Q92597 394 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 SLC10A4Q96EP9 437 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 RNPEPQ9H4A4 650 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 ACKR2O00590 384 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 HBP1O60381 514 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 ZWINTO95229 277 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 LSM8O95777 96 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 EDN1P05305 212 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 PREPLQ4J6C6 727 aaPredicted RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 RAB6CQ53S08 254 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 FOXP3Q9BZS1 431 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 DNAI2Q9GZS0 605 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 RAB6CQ9H0N0 254 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 SNTG2Q9NY99 539 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 GPR25O00155 361 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 UNC5CO95185 931 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 F7P08709 466 aaPredicted RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 SNRPAP09012 282 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 ACAT1P24752 427 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 IVDP26440 423 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 THOC5Q13769 683 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 TWF2Q6IBS0 349 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 RWDD4Q6NW29 188 aaKnown RBP16.54■□□□□ 0.24
SMAD6-201ENST00000288840 ISLR2Q6UXK2 745 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 MINDY3Q9H8M7 445 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 UBP1Q9NZI7 540 aa16.54■□□□□ 0.24
SMAD6-201ENST00000288840 NEMP1O14524 444 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 SMIM24O75264 130 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ATP5HO75947 161 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 AMPD1P23109 780 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 PAX7P23759 505 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ATXN1P54253 815 aaKnown RBP16.53■□□□□ 0.24
SMAD6-201ENST00000288840 GEN1Q17RS7 908 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 POU5F2Q8N7G0 328 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ACSS2Q9NR19 701 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 SIGLEC16A6NMB1 481 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 GOLGA8TH3BQL2 631 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 KCNK1O00180 336 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 TMEM63AO94886 807 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ARIH2O95376 493 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 RPS12P25398 132 aaKnown RBP16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ARL2P36404 184 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 LACTB2Q53H82 288 aaPredicted RBP16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ATG16L1Q676U5 607 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 AGGF1Q8N302 714 aaeCLIP16.53■□□□□ 0.24
SMAD6-201ENST00000288840 E2F7Q96AV8 911 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 OSMRQ99650 979 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 CNPY3Q9BT09 278 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 SETD4Q9NVD3 440 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 PRMT7Q9NVM4 692 aaPredicted RBP16.53■□□□□ 0.24
SMAD6-201ENST00000288840 CYB561D2O14569 222 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
SMAD6-201ENST00000288840 PAK5Q9P286 719 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 C15orf41Q9Y2V0 281 aa16.53■□□□□ 0.24
SMAD6-201ENST00000288840 ALOX15BO15296 676 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 MAFO75444 373 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ZBTB48P10074 688 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 AQP5P55064 265 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 TNFAIP2Q03169 654 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ITKQ08881 620 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 NBPF20Q3BBV1 942 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 CCDC14Q49A88 953 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 PAN2Q504Q3 1202 aaKnown RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 FAM183BPQ6ZVS7 135 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 C1orf127Q8N9H9 656 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 DNERQ8NFT8 737 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 SREK1Q8WXA9 508 aaKnown RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 USP6NLQ92738 828 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 SRPK1Q96SB4 655 aaKnown RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ZFATQ9P243 1243 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 TCRBV9S1A1TA0A576 114 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 SOWAHBA6NEL2 793 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 OPHN1O60890 802 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 KCNA4P22459 653 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 GTF2A2P52657 109 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 POLE2P56282 527 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ANKRD20A2Q5SQ80 823 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ANKRD20A1Q5TYW2 823 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 CAPRIN2Q6IMN6 1127 aaKnown RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 PRPF39Q86UA1 669 aaKnown RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 WDR75Q8IWA0 830 aaKnown RBP16.52■□□□□ 0.24
SMAD6-201ENST00000288840 REPS2Q8NFH8 660 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ZNF518BQ9C0D4 1074 aa16.52■□□□□ 0.24
SMAD6-201ENST00000288840 ELOVL4Q9GZR5 314 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms