RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 NPR1P16066 1061 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PLCG1P19174 1290 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 AOAHP28039 575 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FNTBP49356 437 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ZNF157P51786 506 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 RAD23AP54725 363 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 UBXN2AP68543 259 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SRSF2Q01130 221 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 PPP3CAQ08209 521 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TRIM71Q2Q1W2 868 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 DUSP28Q4G0W2 176 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TDRD10Q5VZ19 366 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 CCDC121Q6ZUS5 278 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PEX26Q7Z412 305 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 DAAM2Q86T65 1068 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CEP57Q86XR8 500 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 VSTM4Q8IW00 320 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SP8Q8IXZ3 490 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ARFGAP2Q8N6H7 521 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ACRBPQ8NEB7 543 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CFHR4Q92496 578 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TEKT1Q969V4 418 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CCDC114Q96M63 670 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PIGSQ96S52 555 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 APOL5Q9BWW9 433 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 IMPG2Q9BZV3 1241 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 GLT8D2Q9H1C3 349 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CPVLQ9H3G5 476 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 HAUS4Q9H6D7 363 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PDE11AQ9HCR9 933 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ZDHHC7Q9NXF8 308 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CTTNBP2NLQ9P2B4 639 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 DDX25Q9UHL0 483 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 MTUS1Q9ULD2 1270 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PCDHA4Q9UN74 947 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 NEDD4P46934 1319 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 IRS2Q9Y4H2 1338 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PTPRSQ13332 1948 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SYNDIG1LA6NDD5 238 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 H0YIN7 160 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 INO80B-WBP1J3KQ70 363 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 HGSO14964 777 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 ERAL1O75616 437 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 IL18RAPO95256 599 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PFKMP08237 780 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CYP2D6P10635 497 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FGFR2P21802 821 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CXCR5P32302 372 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CYP2J2P51589 502 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 HK3P52790 923 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CYP27A1Q02318 531 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PRKG1Q13976 671 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 BAK1Q16611 211 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 WHAMMP3Q1A5X7 153 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CERKLQ49MI3 558 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 C20orf204Q6ZNR8 217 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TMTC3Q6ZXV5 915 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 KCTD1Q719H9 257 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ADAT2Q7Z6V5 191 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 RTN4RL1Q86UN2 441 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 MB21D2Q8IYB1 491 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 TBCKQ8TEA7 893 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 U2AF1L4Q8WU68 220 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 AUTS2Q8WXX7 1259 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FNBP1Q96RU3 617 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 C7orf25Q9BPX7 421 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 NT5C3AQ9H0P0 336 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 MTRF1LQ9UGC7 380 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 FBXL7Q9UJT9 491 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 UTP11Q9Y3A2 253 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 MYPNQ86TC9 1320 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 KIF28PB7ZC32 967 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 KCNK3O14649 394 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 AURKAO14965 403 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TMPRSS2O15393 492 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 GAS7O60861 476 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SOAT2O75908 522 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FLOT1O75955 427 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 VIMP08670 466 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 SRFP11831 508 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ATP6V1B1P15313 513 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TRADDQ15628 312 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ZSCAN26Q16670 478 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 C3orf36Q3SXR2 165 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ZNF658Q5TYW1 1059 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 RESP18Q5W5W9 173 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 IL27RAQ6UWB1 636 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SMIM5Q71RC9 77 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 H1FNTQ75WM6 255 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 PLA2G4DQ86XP0 818 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 ANKS4BQ8N8V4 417 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TRIM58Q8NG06 486 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 THAP4Q8WY91 577 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 RABGGTAQ92696 567 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CNOT6LQ96LI5 555 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 INSM2Q96T92 566 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 PARD6BQ9BYG5 372 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 OR10A4Q9H209 315 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 MKS1Q9NXB0 559 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TMOD4Q9NZQ9 345 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms