RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 RECQL4O94761 1208 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 RHOBTB1O94844 696 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 HOXC6P09630 235 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 FGRP09769 529 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 EIF4BP23588 611 aaKnown RBP11.68□□□□□ -0.54
USP6NL-201ENST00000277575 DNAJB2P25686 324 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ABCE1P61221 599 aaKnown RBP11.68□□□□□ -0.54
USP6NL-201ENST00000277575 HIC1Q14526 733 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 LRRC8EQ6NSJ5 796 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 MRNIPQ6NTE8 343 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ARMC2Q8NEN0 867 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ERP27Q96DN0 273 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ING2Q9H160 280 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ANLNQ9NQW6 1124 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 GLRA2P23416 452 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 NUMBP49757 651 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 TIGD7Q6NT04 549 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-201ENST00000277575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP6NL-201ENST00000277575 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 USP13Q92995 863 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-201ENST00000277575 GAD1Q99259 594 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 HSD17B14Q9BPX1 270 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 KDM4CQ9H3R0 1056 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 NFASCO94856 1347 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 CNTNAP2Q9UHC6 1331 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 SUPT3HB4E1H0 165 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 KLRC4O43908 158 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 SUPT3HO75486 399 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ERFP50548 548 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 ADIGQ0VDE8 80 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-201ENST00000277575 FAM83EQ2M2I3 478 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 MDM1Q8TC05 714 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 KAT5Q92993 513 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 TBCBQ99426 244 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 TMEM134Q9H6X4 195 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 TRIM17Q9Y577 477 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 MYOM1P52179 1685 aa11.68□□□□□ -0.54
USP6NL-201ENST00000277575 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PRPF4O43172 522 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PAEPP09466 180 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 GTF2BQ00403 316 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 FUT2Q10981 343 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 DNAJC3Q13217 504 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 SLC2A14Q8TDB8 520 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 DACT3Q96B18 629 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 KLRG1Q96E93 195 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 RUBCNLQ9H714 662 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 LRRC40Q9H9A6 602 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PKD2L2Q9NZM6 624 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 L1RE1Q9UN81 338 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PCDHB5Q9Y5E4 795 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 TRPV2Q9Y5S1 764 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 C2orf81A6NN90 581 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 ENDOD1O94919 500 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 BMP6P22004 513 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 CCR1P32246 355 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 TMEM161BQ8NDZ6 487 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 DDI1Q8WTU0 396 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 TLR10Q9BXR5 811 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 CDY2AQ9Y6F7 541 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 CDY1Q9Y6F8 540 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 MROH7Q68CQ1 1323 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 NRCAMQ92823 1304 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 HNRNPCL1O60812 293 aaKnown RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 SERPIND1P05546 499 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 OXCT1P55809 520 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 FAM171A1Q5VUB5 890 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 SEC16BQ96JE7 1060 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 APOL5Q9BWW9 433 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 FUT8Q9BYC5 575 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 CDC42EP4Q9H3Q1 356 aaKnown RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 ENTPD7Q9NQZ7 604 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 ENO3P13929 434 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 CYP2F1P24903 491 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PTENP60484 403 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 MEA1Q16626 185 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PTGISQ16647 500 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 PRUNE1Q86TP1 453 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 ARID3BQ8IVW6 561 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 KIAA0319LQ8IZA0 1049 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 ST13P4Q8IZP2 240 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 FAM111AQ96PZ2 611 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 ADAM2Q99965 735 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 RNF208Q9H0X6 261 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 MANSC1Q9H8J5 431 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 AVENQ9NQS1 362 aaPredicted RBP11.67□□□□□ -0.54
USP6NL-201ENST00000277575 VPS28Q9UK41 221 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 SIK3Q9Y2K2 1263 aa11.67□□□□□ -0.54
USP6NL-201ENST00000277575 GLI1P08151 1106 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 AVPR1AP37288 418 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 EPHB3P54753 998 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 DGKZQ13574 1117 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 CHI3L2Q15782 390 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 PRAMEF19Q5SWL8 479 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms