RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PSMD6Q15008 389 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 SNRNP35Q16560 246 aaKnown RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 FBXO43Q4G163 708 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 CC2D1AQ6P1N0 951 aaPredicted RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 RHBDF2Q6PJF5 856 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 VSTM1Q6UX27 236 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 FILIP1Q7Z7B0 1213 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 NELFCDQ8IXH7 590 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 ADGRG2Q8IZP9 1017 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 RDH13Q8NBN7 331 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 MDGA1Q8NFP4 955 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 MYCBPAPQ8TBZ2 947 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 ATP2A3Q93084 1043 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 INTS4Q96HW7 963 aaKnown RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 C8orf48Q96LL4 319 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 CGRRF1Q99675 332 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 B3GNT5Q9BYG0 378 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 SDCBP2Q9H190 292 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 SMPD4Q9NXE4 827 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 MAGEC2Q9UBF1 373 aaPredicted RBP9.55□□□□□ -0.88
TPM3-201ENST00000271850 WASF3Q9UPY6 502 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 PCDHGA5Q9Y5G8 931 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 CPQQ9Y646 472 aa9.55□□□□□ -0.88
TPM3-201ENST00000271850 LNP1A1A4G5 178 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 BCLAF3A2AJT9 711 aaKnown RBP9.54□□□□□ -0.88
TPM3-201ENST00000271850 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 KIAA0391O15091 583 aaKnown RBP9.54□□□□□ -0.88
TPM3-201ENST00000271850 SPTLC2O15270 562 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 EIF3DO15371 548 aaKnown RBP eCLIP9.54□□□□□ -0.88
TPM3-201ENST00000271850 STX6O43752 255 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 GREM1O60565 184 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 ADAM23O75077 832 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 APBB3O95704 486 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 DLATP10515 647 aaKnown RBP9.54□□□□□ -0.88
TPM3-201ENST00000271850 GRIK1P39086 918 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 KIR2DL1P43626 348 aaPredicted RBP9.54□□□□□ -0.88
TPM3-201ENST00000271850 CYP2J2P51589 502 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 CDH8P55286 799 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 MYL6P60660 151 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 TAF10Q12962 218 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 MYO1EQ12965 1108 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 KCNB1Q14721 858 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 DHCR24Q15392 516 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 DUOXA2Q1HG44 320 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 BMT2Q1RMZ1 405 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 C2orf27AQ580R0 203 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 FAM26FQ5R3K3 315 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
TPM3-201ENST00000271850 EMC10Q5UCC4 262 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 PMS2CLQ68D20 193 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 CCDC65Q8IXS2 484 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 GRAMD1CQ8IYS0 662 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 ZMIZ2Q8NF64 920 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 DHX58Q96C10 678 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 KCNK16Q96T55 309 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 C7orf25Q9BPX7 421 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 LSM14BQ9BX40 385 aaKnown RBP9.54□□□□□ -0.88
TPM3-201ENST00000271850 BLZF1Q9H2G9 400 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 SMYD3Q9H7B4 428 aa9.54□□□□□ -0.88
TPM3-201ENST00000271850 CACNA1EQ15878 2313 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 SGK1O00141 431 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CDX4O14627 284 aaPredicted RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 TRIM66O15016 1216 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 TRIM24O15164 1050 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 KLRC4O43908 158 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 PPP6R2O75170 966 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 BEST1O76090 585 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 KCNK5O95279 499 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 VNN1O95497 513 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 TOP3BO95985 862 aaKnown RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 TNNC2P02585 160 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 PTPN1P18031 435 aaKnown RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 GNL1P36915 607 aaPredicted RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 DGKEP52429 567 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 ASIC1P78348 528 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 SHC2P98077 582 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CREB5Q02930 508 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 PSMD2Q13200 908 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CUL4BQ13620 913 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 PKP1Q13835 747 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CRY1Q16526 586 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 ST3GAL2Q16842 350 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 C1orf220Q5T0J3 134 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 TDRD10Q5VZ19 366 aaKnown RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 UNC13DQ70J99 1090 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 MIB1Q86YT6 1006 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CCDC33Q8N5R6 958 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 B3GALNT2Q8NCR0 500 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 SCAMP5Q8TAC9 235 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 RLN3Q8WXF3 142 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CCDC127Q96BQ5 260 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 CNOT6LQ96LI5 555 aaKnown RBP9.53□□□□□ -0.88
TPM3-201ENST00000271850 CEP295NLQ96MC4 621 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 FNBP1Q96RU3 617 aa9.53□□□□□ -0.88
TPM3-201ENST00000271850 MMS19Q96T76 1030 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms