RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SUPT20HL2P0C7V6 817 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 ALDH18A1P54886 795 aaKnown RBP28.64■■■□□ 2.18
CBX4-201ENST00000269397 OSTNP61366 133 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 TRPC3Q13507 836 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 SUPT20HL1Q3ZLR7 823 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 THNSL1Q8IYQ7 743 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 SLC7A3Q8WY07 619 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 TTC1Q99614 292 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 ZNF518BQ9C0D4 1074 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 EFR3BQ9Y2G0 817 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 DCAF8L1A6NGE4 600 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 I3L4J1 428 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 PIK3R2O00459 728 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 USP1O94782 785 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 CHI3L2Q15782 390 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 C1orf228Q6PIY5 440 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 RIPOR1Q6ZS17 1223 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 AKT1S1Q96B36 256 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 IFT43Q96FT9 208 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 RAB6BQ9NRW1 208 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 ZNF212Q9UDV6 495 aa28.64■■■□□ 2.17
CBX4-201ENST00000269397 BAG2O95816 211 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 TOP3BO95985 862 aaKnown RBP28.63■■■□□ 2.17
CBX4-201ENST00000269397 CDH8P55286 799 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 ROR1Q01973 937 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 CWF19L1Q69YN2 538 aaKnown RBP28.63■■■□□ 2.17
CBX4-201ENST00000269397 BRSK2Q8IWQ3 736 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 SMC1BQ8NDV3 1235 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 CFAP61Q8NHU2 1237 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 NSUN6Q8TEA1 469 aaKnown RBP28.63■■■□□ 2.17
CBX4-201ENST00000269397 PANX3Q96QZ0 392 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 C20orf27Q9GZN8 174 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 UTRNP46939 3433 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 CAPN14A8MX76 684 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 ARL2P36404 184 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 AQP5P55064 265 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 MRPS5P82675 430 aaKnown RBP28.63■■■□□ 2.17
CBX4-201ENST00000269397 CAPSQ13938 189 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 ZCCHC23Q6ZST2 131 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 SLC26A11Q86WA9 606 aa28.63■■■□□ 2.17
CBX4-201ENST00000269397 DHX33Q9H6R0 707 aaKnown RBP28.63■■■□□ 2.17
CBX4-201ENST00000269397 MAFGO15525 162 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 SNUPNO95149 360 aaKnown RBP28.62■■■□□ 2.17
CBX4-201ENST00000269397 ERBB2P04626 1255 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 YY1P25490 414 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 IRX4P78413 519 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 ZRSR2Q15696 482 aaKnown RBP28.62■■■□□ 2.17
CBX4-201ENST00000269397 ZNF699Q32M78 642 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 SCUBE1Q8IWY4 988 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 GATA6Q92908 595 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 ZNF302Q9NR11 478 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 H7C0C1 242 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 OATP04181 439 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 CDH5P33151 784 aaPredicted RBP28.62■■■□□ 2.17
CBX4-201ENST00000269397 ATP5OP48047 213 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 TTC39BQ5VTQ0 682 aaPredicted RBP28.62■■■□□ 2.17
CBX4-201ENST00000269397 FAM83AQ86UY5 434 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 TMPRSS6Q8IU80 811 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 ARHGAP24Q8N264 748 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 E2F7Q96AV8 911 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 ZNF668Q96K58 619 aaPredicted RBP28.62■■■□□ 2.17
CBX4-201ENST00000269397 WDR35Q9P2L0 1181 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 PCDHGC3Q9UN70 934 aa28.62■■■□□ 2.17
CBX4-201ENST00000269397 MEI4A8MW99 385 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 KCNJ11Q14654 390 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 TAZQ16635 292 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 IZUMO2Q6UXV1 221 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 CDR2LQ86X02 465 aaPredicted RBP28.61■■■□□ 2.17
CBX4-201ENST00000269397 WDR49Q8IV35 697 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 PEBP4Q96S96 227 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 USP18Q9UMW8 372 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 PLLPQ9Y342 182 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 TTLL3Q9Y4R7 772 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 WNT10BO00744 389 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 ATG7O95352 703 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 ANPEPP15144 967 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 ASPAP45381 313 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 UBAP2LQ14157 1087 aaKnown RBP28.61■■■□□ 2.17
CBX4-201ENST00000269397 DPH6Q7L8W6 267 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 RILPQ96NA2 401 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 SMYD2Q9NRG4 433 aa28.61■■■□□ 2.17
CBX4-201ENST00000269397 A8MXQ7 604 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 POLR2BP30876 1174 aaKnown RBP28.6■■■□□ 2.17
CBX4-201ENST00000269397 RAP1GDS1P52306 607 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 RBBP5Q15291 538 aaKnown RBP28.6■■■□□ 2.17
CBX4-201ENST00000269397 ULK2Q8IYT8 1036 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 GALNT15Q8N3T1 639 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.6■■■□□ 2.17
CBX4-201ENST00000269397 KCNK4Q9NYG8 393 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 SLC7A8Q9UHI5 535 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 MAGEA13PA6NCF6 341 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 ABCD1P33897 745 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 CDH6P55285 790 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 YWHAZP63104 245 aaKnown RBP28.6■■■□□ 2.17
CBX4-201ENST00000269397 FSTL1Q12841 308 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 XYLT1Q86Y38 959 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 EBF4Q9BQW3 602 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 PCMTD2Q9NV79 361 aa28.6■■■□□ 2.17
CBX4-201ENST00000269397 ZC3H7BQ9UGR2 993 aaKnown RBP28.6■■■□□ 2.17
CBX4-201ENST00000269397 PRR5-ARHGAP8B1AHC4 643 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms