RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 CCINQ13939 588 aa8.12□□□□□ -1.11
USP3-201ENST00000268049 KAZNQ674X7 775 aa8.12□□□□□ -1.11
USP3-201ENST00000268049 PANX2Q96RD6 677 aa8.12□□□□□ -1.11
USP3-201ENST00000268049 TRIM15Q9C019 465 aa8.12□□□□□ -1.11
USP3-201ENST00000268049 PXMP2Q9NR77 195 aa8.12□□□□□ -1.11
USP3-201ENST00000268049 DPP3Q9NY33 737 aa8.12□□□□□ -1.11
USP3-201ENST00000268049 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
USP3-201ENST00000268049 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
USP3-201ENST00000268049 A0A088AWK7 358 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SRGAP2O75044 1071 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 AP1G2O75843 785 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 KRT7P08729 469 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 MYBL1P10243 752 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 NCF2P19878 526 aaPredicted RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 ZNF10P21506 573 aaPredicted RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 ST13P50502 369 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 RESTQ13127 1097 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 TEDDM1Q5T9Z0 273 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 PCNX4Q63HM2 1172 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SERPINA13PQ6UXR4 307 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 RASAL3Q86YV0 1011 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 REPS2Q8NFH8 660 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 COG1Q8WTW3 980 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 ABHD8Q96I13 439 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 OSMRQ99650 979 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SMYD3Q9H7B4 428 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 NOD2Q9HC29 1040 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 POLE3Q9NRF9 147 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 PPARGC1AQ9UBK2 798 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 NFIBO00712 420 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 HSPA9P38646 679 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 LRRC63Q05C16 580 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 NAALADL2Q58DX5 795 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 PPP6R3Q5H9R7 873 aaPredicted RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 SLC27A1Q6PCB7 646 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 TMC5Q6UXY8 1006 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SGSM3Q96HU1 749 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 PBKQ96KB5 322 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 DACH2Q96NX9 599 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 STK33Q9BYT3 514 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 KCNH7Q9NS40 1196 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SOHLH2Q9NX45 425 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 COL22A1Q8NFW1 1626 aaPredicted RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 CFAP69A5D8W1 941 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 POTECB2RU33 542 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 F9P00740 461 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 MT-ND3P03897 115 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 POLR2FP61218 127 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 YWHAGP61981 247 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP3-201ENST00000268049 GUCY1A3Q02108 690 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 TLE2Q04725 743 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 NSUN2Q08J23 767 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP3-201ENST00000268049 TP53BP2Q13625 1128 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 WDR72Q3MJ13 1102 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 TTLL9Q3SXZ7 439 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 TMEM270Q6UE05 265 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 RD3Q7Z3Z2 195 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 NPAS4Q8IUM7 802 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CATSPER1Q8NEC5 780 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 WDR48Q8TAF3 677 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 DNAJC11Q9NVH1 559 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 GCNT4Q9P109 453 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SEPT3Q9UH03 358 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 GTPBP10A4D1E9 387 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 WDR91A4D1P6 747 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 DNM1LO00429 736 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CAPN1P07384 714 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 YWHAQP27348 245 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CDH8P55286 799 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 POLR2LP62875 67 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 PTK7Q13308 1070 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CYTH1Q15438 398 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 DPCR1Q3MIW9 517 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 SARM1Q6SZW1 724 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 HORMAD1Q86X24 394 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CATSPER3Q86XQ3 398 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 RBM41Q96IZ5 413 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 CCT8L2Q96SF2 557 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CELF4Q9BZC1 486 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 NEUROG2Q9H2A3 272 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 VIPAS39Q9H9C1 493 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 IL17RBQ9NRM6 502 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 AFF4Q9UHB7 1163 aaKnown RBP8.11□□□□□ -1.11
USP3-201ENST00000268049 RCOR1Q9UKL0 485 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 PCDHGB4Q9UN71 923 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 CRYBG1Q9Y4K1 1723 aa8.11□□□□□ -1.11
USP3-201ENST00000268049 MAGEA13PA6NCF6 341 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 ARVCFO00192 962 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 IGSF6O95976 241 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 SLC10A3P09131 477 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 PLS3P13797 630 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 PTPN2P17706 415 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 CXCR2P25025 360 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 KCNA10Q16322 511 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 EOGTQ5NDL2 527 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 MKL1Q969V6 931 aa8.1□□□□□ -1.11
USP3-201ENST00000268049 KLHL25Q9H0H3 589 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms