RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CAPN8A6NHC0 703 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 E5RJQ4 531 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 H3BSA7 217 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 ALOX15BO15296 676 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 SERPINB7O75635 380 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 TNFAIP8O95379 198 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 ALDH2P05091 517 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 P4HBP07237 508 aaKnown RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 SERPINB6P35237 376 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 HALP42357 657 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 ACADVLP49748 655 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 CCR3P51677 355 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 KLF1Q13351 362 aaPredicted RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 TBCCQ15814 346 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 NLGN2Q8NFZ4 835 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 DDX1Q92499 740 aaKnown RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 JADE3Q92613 823 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 PCIF1Q9H4Z3 704 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 PLGRKTQ9HBL7 147 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 HBS1LQ9Y450 684 aaKnown RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 CASQ2O14958 399 aaPredicted RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 LYPLA2O95372 231 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 DHRS4L1P0CG22 281 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 RAG1P15918 1043 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 STAT2P52630 851 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 VCPP55072 806 aaKnown RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 NAA20P61599 178 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 MTMR2Q13614 643 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 SPIDRQ14159 915 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CCDC142Q17RM4 750 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 AHI1Q8N157 1196 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 JDP2Q8WYK2 163 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CBWD1Q9BRT8 395 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CCDC106Q9BWC9 280 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 WWP1Q9H0M0 922 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 WRAP73Q9P2S5 460 aaPredicted RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CEPT1Q9Y6K0 416 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 PRR5-ARHGAP8B1AHC4 643 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ZBTB39O15060 712 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 MAFGO15525 162 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CD48P09326 243 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CDH2P19022 906 aaPredicted RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 CPOXP36551 454 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ALDH18A1P54886 795 aaKnown RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 SNAP25P60880 206 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ARHGAP8P85298 464 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 GCNT1Q02742 428 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 RELAQ04206 551 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 MAP7D1Q3KQU3 841 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 MFSD4BQ5TF39 518 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 CIAPIN1Q6FI81 312 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 NIPA1Q7RTP0 329 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ANKMY2Q8IV38 441 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 RHOT1Q8IXI2 618 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 KATNAL2Q8IYT4 538 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 FBXL13Q8NEE6 735 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 GIPC3Q8TF64 312 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 MZB1Q8WU39 189 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 KAT5Q92993 513 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 FAM111AQ96PZ2 611 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 PAFAH2Q99487 392 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 HNRNPABQ99729 332 aaKnown RBP13.65□□□□□ -0.22
NUP54-201ENST00000264883 ZNF696Q9H7X3 374 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 TMOD2Q9NZR1 351 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 FETUBQ9UGM5 382 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 APPL1Q9UKG1 709 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 STRIP2Q9ULQ0 834 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 INPP5FQ9Y2H2 1132 aa13.65□□□□□ -0.22
NUP54-201ENST00000264883 IPO5O00410 1097 aaKnown RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 DNAJA2O60884 412 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 CFBP00751 764 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 NR1H2P55055 460 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 GPX6P59796 221 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 SLC25A3Q00325 362 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 HSF5Q4G112 596 aaPredicted RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 RABGAP1LQ5R372 815 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 FKBP1CQ5VVH2 108 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 DRICH1Q6PGQ1 229 aaPredicted RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 MCOLN2Q8IZK6 566 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 HIPK4Q8NE63 616 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 DEPTORQ8TB45 409 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 DCUN1D1Q96GG9 259 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 VPS50Q96JG6 964 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 AGAP3Q96P47 875 aa13.64□□□□□ -0.23
NUP54-201ENST00000264883 PRPF18Q99633 342 aaKnown RBP13.64□□□□□ -0.23
NUP54-201ENST00000264883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms