RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 SMAPO00193 183 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
PKP1-201ENST00000263946 ARFIP2P53365 341 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 ZNF200P98182 395 aaPredicted RBP11.95□□□□□ -0.5
PKP1-201ENST00000263946 SREBF2Q12772 1141 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 INPP5AQ14642 412 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 MDM1Q8TC05 714 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 EXT2Q93063 718 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 KLF6Q99612 283 aaPredicted RBP11.95□□□□□ -0.5
PKP1-201ENST00000263946 PARVBQ9HBI1 364 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 SNTG2Q9NY99 539 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.95□□□□□ -0.5
PKP1-201ENST00000263946 NKRFO15226 690 aaKnown RBP eCLIP11.95□□□□□ -0.5
PKP1-201ENST00000263946 FAM107AO95990 144 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 CCDC15Q0P6D6 951 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 PDK1Q15118 436 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 CCNG2Q16589 344 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
PKP1-201ENST00000263946 KDELC2Q7Z4H8 507 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 TBC1D19Q8N5T2 526 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 ACTL9Q8TC94 416 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 GRAMD1AQ96CP6 724 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 MRGBPQ9NV56 204 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 GTSE1Q9NYZ3 720 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 MEFVO15553 781 aaPredicted RBP11.95□□□□□ -0.5
PKP1-201ENST00000263946 SASH3O75995 380 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 LGALS2P05162 132 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 RALBP11234 206 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 PRAMEP78395 509 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 DMC1Q14565 340 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 FBXO47Q5MNV8 452 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 FAXCQ5TGI0 409 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 RAB42Q8N4Z0 105 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 RXFP2Q8WXD0 754 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 SHC3Q92529 594 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 KRT35Q92764 455 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 CAVIN3Q969G5 261 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 KDM3BQ7LBC6 1761 aa11.95□□□□□ -0.5
PKP1-201ENST00000263946 C3orf70A6NLC5 250 aaPredicted RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 M0QYT0 321 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CES2O00748 559 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 OR1G1P47890 313 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 TMED10P49755 219 aaKnown RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 SPOCD1Q6ZMY3 1216 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 ZNF662Q6ZS27 426 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CCNYL1Q8N7R7 359 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 PBXIP1Q96AQ6 731 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CLMNQ96JQ2 1002 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 TMEM121Q9BTD3 319 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 ETNK1Q9HBU6 452 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 DDIT4Q9NX09 232 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 SPEF2Q9C093 1822 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 M0R2N6 131 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 UBXN8O00124 270 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 MAP4P27816 1152 aaKnown RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 NDST1P52848 882 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 FCGRTP55899 365 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 TRADDQ15628 312 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 SPATA21Q7Z572 469 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 FAM71AQ8IYT1 594 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 LNX1Q8TBB1 728 aaPredicted RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 FAM172AQ8WUF8 416 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 ZFYVE1Q9HBF4 777 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 AVENQ9NQS1 362 aaPredicted RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 COL20A1Q9P218 1284 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 GGT7Q9UJ14 662 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 BARX2Q9UMQ3 279 aaPredicted RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 PCDHA3Q9Y5H8 950 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 PHLPP1O60346 1717 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 LACTBL1A8MY62 500 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 LZTS3O60299 673 aaPredicted RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 AP1G2O75843 785 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 PAN2Q504Q3 1202 aaKnown RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 TJP2Q9UDY2 1190 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 USP18Q9UMW8 372 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CASZ1Q86V15 1759 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CYB561D2O14569 222 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CALCAP01258 141 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 RARAP10276 462 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 EPHB2P29323 1055 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 CAPSQ13938 189 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 CAPRIN2Q6IMN6 1127 aaKnown RBP11.94□□□□□ -0.5
PKP1-201ENST00000263946 BBS7Q8IWZ6 715 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 ZFP42Q96MM3 310 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 SEMA4AQ9H3S1 761 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 PPCSQ9HAB8 311 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 ADA2Q9NZK5 511 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 WHRNQ9P202 907 aa11.94□□□□□ -0.5
PKP1-201ENST00000263946 EIF2S1P05198 315 aaKnown RBP11.93□□□□□ -0.5
PKP1-201ENST00000263946 YY1P25490 414 aa11.93□□□□□ -0.5
PKP1-201ENST00000263946 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
PKP1-201ENST00000263946 BCAT1P54687 386 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms