RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 ATXN3P54252 364 aaPredicted RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 CHRNB3Q05901 458 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 JADE3Q92613 823 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 FAM118BQ9BPY3 351 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 EFCAB1Q9HAE3 211 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 AGPAT3Q9NRZ7 376 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 AAR2Q9Y312 384 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 PDGFRBP09619 1106 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 MLH1P40692 756 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 ANXA11P50995 505 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 NAGPAQ9UK23 515 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 SHOC2Q9UQ13 582 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 PTPRUQ92729 1446 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 NBNO60934 754 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 VPS26AO75436 327 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 ANKRD6Q9Y2G4 727 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 TADA2AO75478 443 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 EIF2S1P05198 315 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 H2AFXP16104 143 aaPredicted RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 CCDC153Q494R4 210 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 KCNB2Q92953 911 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 EXOSC4Q9NPD3 245 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 C1DQ13901 141 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 TTLL9Q3SXZ7 439 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 ZNF280CQ8ND82 737 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 PI4K2AQ9BTU6 479 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 SCUBE2Q9NQ36 999 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 LRCH1Q9Y2L9 728 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 MTCL1Q9Y4B5 1905 aaKnown RBP12.04□□□□□ -0.48
SORL1-201ENST00000260197 NDUFB10O96000 172 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 PRLRP16471 622 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 NR2C2P49116 596 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.04□□□□□ -0.48
SORL1-201ENST00000260197 CTNNAL1Q9UBT7 734 aa12.04□□□□□ -0.48
SORL1-201ENST00000260197 RBP3P10745 1247 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 ST13P50502 369 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 SEC24CP53992 1094 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SNAPC2Q13487 334 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 PLA2G4FQ68DD2 849 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 YAF2Q8IY57 180 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 C19orf81C9J6K1 198 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 NCAM2O15394 837 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 THRAP10827 490 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 CNTN1Q12860 1018 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 ANGPT1Q15389 498 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 ZFP1Q6P2D0 407 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 RIN2Q8WYP3 895 aaPredicted RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 SLITRK1Q96PX8 696 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 NR5A2O00482 541 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 TALDO1P37837 337 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 ST8SIA6P61647 398 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 PSMC6P62333 389 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 ILF2Q12905 390 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 ZRANB3Q5FWF4 1079 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 RIT2Q99578 217 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SCN3AQ9NY46 2000 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 CPA2P48052 419 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.03□□□□□ -0.48
SORL1-201ENST00000260197 ACAD10Q6JQN1 1059 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 KIF26BQ2KJY2 2108 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 GLRA3O75311 464 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 IL31Q6EBC2 164 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 MTDHQ86UE4 582 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 CD248Q9HCU0 757 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 DDX20Q9UHI6 824 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 AVPR1AP37288 418 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SLC25A41Q8N5S1 370 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 CATSPER2Q96P56 530 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SEPT5Q99719 369 aaPredicted RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 THUMPD3Q9BV44 507 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 FUT8Q9BYC5 575 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SPASTQ9UBP0 616 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 VANGL2Q9ULK5 521 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 TSNQ15631 228 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 DPP10Q8N608 796 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SLC30A1Q9Y6M5 507 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 MROH1Q8NDA8 1641 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 SCARF1Q14162 830 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 C10orf120Q5SQS8 335 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 PAFAH2Q99487 392 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 H0YC42 278 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 CPT1AP50416 773 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 PARK7Q99497 189 aaKnown RBP12.03□□□□□ -0.48
SORL1-201ENST00000260197 CRLS1Q9UJA2 301 aa12.03□□□□□ -0.48
SORL1-201ENST00000260197 TRIM24O15164 1050 aa12.02□□□□□ -0.48
SORL1-201ENST00000260197 MRNIPQ6NTE8 343 aa12.02□□□□□ -0.48
SORL1-201ENST00000260197 LBHD1Q9BQE6 289 aaPredicted RBP12.02□□□□□ -0.48
SORL1-201ENST00000260197 TSEN34Q9BSV6 310 aaKnown RBP12.02□□□□□ -0.48
SORL1-201ENST00000260197 PRDM5Q9NQX1 630 aaPredicted RBP12.02□□□□□ -0.48
SORL1-201ENST00000260197 HAO1Q9UJM8 370 aa12.02□□□□□ -0.48
SORL1-201ENST00000260197 SNX13Q9Y5W8 968 aa12.02□□□□□ -0.48
SORL1-201ENST00000260197 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms