RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 NEDD1Q8NHV4 660 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 MDM1Q8TC05 714 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 CAMKK2Q96RR4 588 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ZNF184Q99676 751 aaPredicted RBP4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ZBED2Q9BTP6 218 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 CEP44Q9C0F1 390 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 PARVBQ9HBI1 364 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ARHGEF3Q9NR81 526 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 HAO1Q9UJM8 370 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 NR5A2O00482 541 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 KLHL41O60662 606 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 IL6P05231 212 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 PTGER2P43116 358 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 FXR1P51114 621 aaKnown RBP eCLIP4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ATP6AP1LQ52LC2 224 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 NUP188Q5SRE5 1749 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ARMC3Q5W041 872 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 FAM45AQ8TCE6 357 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 GDPD5Q8WTR4 605 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 RAD54BQ9Y620 910 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 V9GYQ6 96 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 SYNDIG1LA6NDD5 238 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ATXN8OSP0DMR3 200 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 AKR1B1P15121 316 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 GRK2P25098 689 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 ITGA9Q13797 1035 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 OASLQ15646 514 aaKnown RBP4.96□□□□□ -1.62
RC3H1-201ENST00000258349 FAM98BQ52LJ0 330 aaKnown RBP4.96□□□□□ -1.62
RC3H1-201ENST00000258349 SBK1Q52WX2 424 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 KLHL12Q53G59 568 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 XKR3Q5GH77 459 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 SPANXN2Q5MJ10 180 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 CYP4A22Q5TCH4 519 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 PIDD1Q9HB75 910 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 EXOSC4Q9NPD3 245 aaKnown RBP4.96□□□□□ -1.62
RC3H1-201ENST00000258349 TMEM51Q9NW97 253 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 MTMR4Q9NYA4 1195 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 TMCO1Q9UM00 188 aa4.96□□□□□ -1.62
RC3H1-201ENST00000258349 PIN4Q9Y237 131 aaKnown RBP4.96□□□□□ -1.62
RC3H1-201ENST00000258349 MAGEB16A2A368 324 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 CENPXA8MT69 81 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 RBP1P09455 135 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 HPCAL1P37235 193 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PHKG1Q16816 387 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PDZK1Q5T2W1 519 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 DENND5BQ6ZUT9 1274 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 KDELC2Q7Z4H8 507 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 EID3Q8N140 333 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 SLC44A5Q8NCS7 719 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PABPC5Q96DU9 382 aaKnown RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 RMND5BQ96G75 393 aaPredicted RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 LRRC40Q9H9A6 602 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 METTL5Q9NRN9 209 aaKnown RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ERAP1Q9NZ08 941 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 KLHL3Q9UH77 587 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ABT1Q9ULW3 272 aaKnown RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 USP18Q9UMW8 372 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ALG6Q9Y672 507 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 AGLP35573 1532 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 VPS26AO75436 327 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 HLA-DRAP01903 254 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 SERPIND1P05546 499 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 GZMAP12544 262 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 RARGP13631 454 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 RGS2P41220 211 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PRKCEQ02156 737 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PLA2G4FQ68DD2 849 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 OTOAQ7RTW8 1153 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 MTDHQ86UE4 582 aaKnown RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ERO1BQ86YB8 467 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 C9orf72Q96LT7 481 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PPP1R10Q96QC0 940 aaKnown RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 HDHD2Q9H0R4 259 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ANKEF1Q9NU02 776 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 AP3M1Q9Y2T2 418 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ITGB4P16144 1822 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 MOCS2O96007 188 aaPredicted RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 CPB1P15086 417 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 STAT5BP51692 787 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 EPHA10Q5JZY3 1008 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 TMC5Q6UXY8 1006 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 IFNEQ86WN2 208 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 YAF2Q8IY57 180 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 LRRC34Q8IZ02 419 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 OR2W6PQ8NHA6 318 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ANKRD49Q8WVL7 239 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 PPP2R3CQ969Q6 453 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 TINF2Q9BSI4 451 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 THUMPD3Q9BV44 507 aaKnown RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ZNF518BQ9C0D4 1074 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 CLEC4MQ9H2X3 399 aaPredicted RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ARMC7Q9H6L4 198 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 SPASTQ9UBP0 616 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 UBA2Q9UBT2 640 aaPredicted RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 DSEQ9UL01 958 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 DNALI1O14645 258 aaPredicted RBP4.95□□□□□ -1.62
RC3H1-201ENST00000258349 GARTP22102 1010 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ITGA1P56199 1179 aa4.95□□□□□ -1.62
RC3H1-201ENST00000258349 ALDH6A1Q02252 535 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms