RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 FUT11Q495W5 492 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 IFIT1BQ5T764 474 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 NECAB2Q7Z6G3 386 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 ARHGEF19Q8IW93 802 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 LSMEM1Q8N8F7 131 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 FLAD1Q8NFF5 587 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 ATXN2LQ8WWM7 1075 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 SLC29A1Q99808 456 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 DHRS9Q9BPW9 319 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 MKNK1Q9BUB5 465 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 OSBPL7Q9BZF2 842 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 MLXIPLQ9NP71 852 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 PCDHB16Q9NRJ7 776 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 USTQ9Y2C2 406 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 AXIN2Q9Y2T1 843 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 ASB3Q9Y575 518 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 TNNC2P02585 160 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 UBL4AP11441 157 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CFL1P23528 166 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 POLR2BP30876 1174 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 HIBADHP31937 336 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 MAPK9P45984 424 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CRKLP46109 303 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 RGS19P49795 217 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 HSD17B4P51659 736 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CCDC137Q6PK04 289 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 FASTKD5Q7L8L6 764 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 C2CD5Q86YS7 1000 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CLEC4FQ8N1N0 589 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 OR8H1Q8NGG4 311 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 SGCDQ92629 289 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF333Q96JL9 665 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 BTBD10Q9BSF8 475 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 TUBGCP2Q9BSJ2 902 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CABP5Q9NP86 173 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 VPS45Q9NRW7 570 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 KIF28PB7ZC32 967 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 GMDSO60547 372 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 KLHL2O95198 593 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 YES1P07947 543 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CCNA2P20248 432 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CHRNA3P32297 505 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 SIK1P57059 783 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC74AQ0VAA2 488 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 MPP7Q5T2T1 576 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CACHD1Q5VU97 1274 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CRLF3Q8IUI8 442 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CCDC71Q8IV32 467 aaPredicted RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 TRIM62Q9BVG3 475 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 PHF20Q9BVI0 1012 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 SYTL2Q9HCH5 934 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 CFL2Q9Y281 166 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 AFF2P51816 1311 aa6.98□□□□□ -1.29
PDGFRA-201ENST00000257290 MEI4A8MW99 385 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 IL33O95760 270 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 P4HBP07237 508 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GSPT1P15170 499 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ARF4P18085 180 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RPA1P27694 616 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RRM2P31350 389 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ETFBP38117 255 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GPR85P60893 370 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 RTN1Q16799 776 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 TBRG1Q3YBR2 411 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SSX9Q7RTT3 188 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 MICU3Q86XE3 530 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 DSCC1Q9BVC3 393 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SLC26A6Q9BXS9 759 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 METTL8Q9H825 291 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SPASTQ9UBP0 616 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 POLHQ9Y253 713 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 MAST3O60307 1309 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 POLR2DO15514 142 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ENO1P06733 434 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 IFI30P13284 250 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ALOX12P18054 663 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 LIG4P49917 911 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 POLA2Q14181 598 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 GALNT3Q14435 633 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 TAB1Q15750 504 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SLC51BQ86UW2 128 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 COL23A1Q86Y22 540 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 C10orf53Q8N6V4 93 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 CMTM5Q96DZ9 223 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ERP44Q9BS26 406 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 HEMGNQ9BXL5 484 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 MRPL44Q9H9J2 332 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SAR1AQ9NR31 198 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ING4Q9UNL4 249 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 CD163L1Q9NR16 1453 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 C15orf38-AP3S2A0A0A6YYH1 394 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 ARHGEF33A8MVX0 844 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 BTBD18B2RXH4 712 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 BHMG1C9JSJ3 638 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 EML1O00423 815 aa6.97□□□□□ -1.29
PDGFRA-201ENST00000257290 SGCEO43556 437 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms