RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 HOXC10Q9NYD6 342 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 STRIP2Q9ULQ0 834 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 BPTFQ12830 3046 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 LY75O60449 1722 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 LACTBL1A8MY62 500 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 TCEA3O75764 348 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 PGM1P36871 562 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 PTPN11Q06124 597 aaPredicted RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 FKBP1CQ5VVH2 108 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 PCGF5Q86SE9 256 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 ACOT1Q86TX2 421 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 NUDCD3Q8IVD9 361 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 MAGEC3Q8TD91 643 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 FAM149B1Q96BN6 582 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 SRPK1Q96SB4 655 aaKnown RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 MIPEPQ99797 713 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 ACO2Q99798 780 aaKnown RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 DDX50Q9BQ39 737 aaKnown RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 DLGAP2Q9P1A6 1054 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 SLC24A2Q9UI40 661 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 PACSIN3Q9UKS6 424 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 EME2A4GXA9 379 aaPredicted RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 FCHO1O14526 889 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 LGR5O75473 907 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 ARIH2O95376 493 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 SERPINB4P48594 390 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 EFHC2Q5JST6 749 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 RINLQ6ZS11 566 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 PEBP4Q96S96 227 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 MMP19Q99542 508 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 CADM1Q9BY67 442 aaKnown RBP14.07□□□□□ -0.16
VHL-201ENST00000256474 LRMDAQ9H2I8 198 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 ACSS3Q9H6R3 686 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
VHL-201ENST00000256474 PRPF4O43172 522 aaKnown RBP eCLIP14.06□□□□□ -0.16
VHL-201ENST00000256474 MED7O43513 233 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 HCRTO43612 131 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 MSCO60682 206 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 FARP2O94887 1054 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 PTPN4P29074 926 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 ADORA2BP29275 332 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 DALRD3Q5D0E6 543 aaKnown RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 TMEM154Q6P9G4 183 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 TRMT10BQ6PF06 316 aaKnown RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 DNAJC9Q8WXX5 260 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 ELOVL4Q9GZR5 314 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 MAFBQ9Y5Q3 323 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 SNX9Q9Y5X1 595 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 A0A087WZ62 844 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 UBTFL6P0CB48 400 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 TPBGLP0DKB5 382 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 LCP1P13796 627 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 ASPAP45381 313 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 POLNQ7Z5Q5 900 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 NAT8LQ8N9F0 302 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 TTC13Q8NBP0 860 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 CCNYQ8ND76 341 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 NKD2Q969F2 451 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 AGAP3Q96P47 875 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 FDXACB1Q9BRP7 624 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 ASNSD1Q9NWL6 643 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 DRG1Q9Y295 367 aaKnown RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 SNCAIPQ9Y6H5 919 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 LOC100653049A0A140TA62 436 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 KRT34O76011 436 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 CCNB1P14635 433 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 GTF2A2P52657 109 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 NDST1P52848 882 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 AQP5P55064 265 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 RASA2Q15283 850 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 CA9Q16790 459 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 MOB2Q70IA6 237 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 XYLT1Q86Y38 959 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 FBXO27Q8NI29 283 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 TRPM4Q8TD43 1214 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 WDR60Q8WVS4 1066 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 NLRP7Q8WX94 980 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 NSL1Q96IY1 281 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 PDGFCQ9NRA1 345 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 TTLL3Q9Y4R7 772 aa14.06□□□□□ -0.16
VHL-201ENST00000256474 COL11A2P13942 1736 aaPredicted RBP14.06□□□□□ -0.16
VHL-201ENST00000256474 SIGLEC16A6NMB1 481 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 GPR25O00155 361 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 SMIM24O75264 130 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 ATP5HO75947 161 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 EIF4BP23588 611 aaKnown RBP14.05□□□□□ -0.16
VHL-201ENST00000256474 ABL2P42684 1182 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
VHL-201ENST00000256474 BBS12Q6ZW61 710 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 C1orf127Q8N9H9 656 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 OR6B3Q8NGW1 331 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 DCAKDQ8WVC6 231 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 USP6NLQ92738 828 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 HPDLQ96IR7 371 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 FAM49AQ9H0Q0 323 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms