RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 DDHD2O94830 711 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 ATG7O95352 703 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 ASS1P00966 412 aaKnown RBP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 FOSL1P15407 271 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 LBRQ14739 615 aaKnown RBP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 ZBED8Q8IZ13 594 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 ALLCQ8N6M5 410 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 UBR7Q8N806 425 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 C7orf57Q8NEG2 295 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 MAML1Q92585 1016 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 EIF2AQ9BY44 585 aaKnown RBP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 IMPG2Q9BZV3 1241 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 GRID1Q9ULK0 1009 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 SGK1O00141 431 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 ADCY3O60266 1144 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 SUN1O94901 812 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 GDF10P55107 478 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 EFTUD2Q15029 972 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 LY6KQ17RY6 165 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 EAPPQ56P03 285 aaPredicted RBP11.79□□□□□ -0.52
PDE6B-201ENST00000255622 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 C11orf74Q86VG3 221 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 RCOR2Q8IZ40 523 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 ANKLE1Q8NAG6 615 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 VPS37BQ9H9H4 285 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 NKIRAS1Q9NYS0 192 aa11.79□□□□□ -0.52
PDE6B-201ENST00000255622 hCG_1818297A0A087WSY0 165 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TJP3O95049 919 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 GSTA1P08263 222 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TAC1P20366 129 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CCND1P24385 295 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 NRLP54845 237 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 DNAJC3Q13217 504 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 STAT4Q14765 748 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CEP44Q9C0F1 390 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 ZNF112Q9UJU3 913 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 POLIQ9UNA4 740 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 IGF2BP3O00425 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 MSCO60682 206 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 SPATA31D3P0C874 917 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 RALGDSQ12967 914 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 GALNTL6Q49A17 601 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 DENND1BQ6P3S1 775 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 ARHGEF18Q6ZSZ5 1173 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 SPATA31D4Q6ZUB0 917 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 BRSK2Q8IWQ3 736 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 BBOF1Q8ND07 529 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 NIFKQ9BYG3 293 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 NXF1Q9UBU9 619 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CYTH4Q9UIA0 394 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 A0A1W2PPM1 405 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 A6NJR5 290 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CD48P09326 243 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TGFB3P10600 412 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 IL1R2P27930 398 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 RFC1P35251 1148 aaPredicted RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CDKN2BP42772 138 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 ALDH5A1P51649 535 aaPredicted RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TARBP2Q15633 366 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 OASLQ15646 514 aaKnown RBP11.78□□□□□ -0.52
PDE6B-201ENST00000255622 ANKRD22Q5VYY1 191 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 EMC1Q8N766 993 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 JOSD2Q8TAC2 188 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TRPM4Q8TD43 1214 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 TRAPPC12Q8WVT3 735 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 C12orf42Q96LP6 360 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 MAGEB18Q96M61 343 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 CCDC77Q9BR77 488 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 PRKAG3Q9UGI9 489 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 ARL2BPQ9Y2Y0 163 aa11.78□□□□□ -0.52
PDE6B-201ENST00000255622 FAM47DPA6NHR8 397 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 KRT15P19012 456 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 HOXD10P28358 340 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 RPA3P35244 121 aaPredicted RBP11.77□□□□□ -0.52
PDE6B-201ENST00000255622 GALK1P51570 392 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 STAT5BP51692 787 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 TSPY1Q01534 308 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 PDIA2Q13087 525 aaKnown RBP11.77□□□□□ -0.52
PDE6B-201ENST00000255622 TFDP3Q5H9I0 405 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 RNASEH2BQ5TBB1 312 aaKnown RBP11.77□□□□□ -0.52
PDE6B-201ENST00000255622 TRABD2AQ86V40 505 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 ECHDC2Q86YB7 292 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 RELL1Q8IUW5 271 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 TMEM192Q8IY95 271 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 ARFGAP1Q8N6T3 406 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms