RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 GRAMD1AQ96CP6 724 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 RXFP1Q9HBX9 757 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 FAM49BQ9NUQ9 324 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 SNX9Q9Y5X1 595 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 RALGAPA2Q2PPJ7 1873 aa20.39■□□□□ 0.86
CDC42EP1-201ENST00000249014 HGSO14964 777 aaPredicted RBP20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 GABBR2O75899 941 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 NPTXRO95502 500 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 STIP1P31948 543 aaKnown RBP20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 EPHX2P34913 555 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 CCNA1P78396 465 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 RNASELQ05823 741 aaKnown RBP20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 TMEM62Q0P6H9 643 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 SNCBQ16143 134 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 PDK4Q16654 411 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 RNF43Q68DV7 783 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 PLCD4Q9BRC7 762 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 FAM124BQ9H5Z6 455 aaPredicted RBP20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 ECT2Q9H8V3 914 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 SNTG2Q9NY99 539 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 KLHL14Q9P2G3 628 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 PHTF1Q9UMS5 762 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 CHMP2BQ9UQN3 213 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 GINS2Q9Y248 185 aa20.39■□□□□ 0.85
CDC42EP1-201ENST00000249014 FGFR1P11362 822 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 SMPD1P17405 629 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 HOXA11P31270 313 aaPredicted RBP20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 ACVR2BQ13705 512 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 FAM47CQ5HY64 1035 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 SCYL2Q6P3W7 929 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 RGS9BPQ6ZS82 235 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 SCUBE3Q8IX30 993 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 TTC39CQ8N584 583 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 GBP7Q8N8V2 638 aaPredicted RBP20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZC3H15Q8WU90 426 aaKnown RBP20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 DCAKDQ8WVC6 231 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 THOC1Q96FV9 657 aaKnown RBP20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 LPIN3Q9BQK8 851 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 USP29Q9HBJ7 922 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 NGRNQ9NPE2 291 aaKnown RBP20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 STARD13Q9Y3M8 1113 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 SMAPO00193 183 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 PDHXO00330 501 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 MMP3P08254 477 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 ELK3P41970 407 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 KCNJ2P63252 427 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 TFDP2Q14188 446 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 KRT81Q14533 505 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 KCNJ11Q14654 390 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 KLHL38Q2WGJ6 581 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 PQLC3Q8N755 202 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 PLD5Q8N7P1 536 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 FAM172AQ8WUF8 416 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 SLC10A4Q96EP9 437 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 MIS12Q9H081 205 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 RNF19AQ9NV58 838 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 TUBGCP4Q9UGJ1 667 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 HES2Q9Y543 173 aa20.38■□□□□ 0.85
CDC42EP1-201ENST00000249014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 H7C0C1 242 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 DPYSL4O14531 572 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 ATP5OP48047 213 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 CA9Q16790 459 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 SWT1Q5T5J6 900 aaKnown RBP20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 LVRNQ6Q4G3 990 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZNF410Q86VK4 478 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 PPP1R13LQ8WUF5 828 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 SLC35F5Q8WV83 523 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 SLC4A5Q9BY07 1137 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 EIF2AQ9BY44 585 aaKnown RBP20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 B3GNT5Q9BYG0 378 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 SETD4Q9NVD3 440 aa20.37■□□□□ 0.85
CDC42EP1-201ENST00000249014 CFAP73A6NFT4 308 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 CHUKO15111 745 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 PAPSS1O43252 624 aaPredicted RBP20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 HCRTO43612 131 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 AVILO75366 819 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 MAP3K6O95382 1288 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 SLC6A3Q01959 620 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 STILQ15468 1287 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 TMEM110Q86TL2 294 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 AGGF1Q8N302 714 aaeCLIP20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 C18orf25Q96B23 403 aaPredicted RBP20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 ADAMTS10Q9H324 1103 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 CDHR5Q9HBB8 845 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 PCDH18Q9HCL0 1135 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 SSU72Q9NP77 194 aaKnown RBP20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 GJD2Q9UKL4 321 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 ADCY6O43306 1168 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 TFE3P19532 575 aaPredicted RBP20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 MSH2P43246 934 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 ZBTB6Q15916 424 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 DCAF4L1Q3SXM0 396 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 GLRA4Q5JXX5 417 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 PCDH19Q8TAB3 1148 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 GTF3C2Q8WUA4 911 aaPredicted RBP20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 LRRN4Q8WUT4 740 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 SNX27Q96L92 541 aa20.36■□□□□ 0.85
CDC42EP1-201ENST00000249014 SNRNP25Q9BV90 132 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms