RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 VDRP11473 427 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 TARSP26639 723 aaKnown RBP13.48□□□□□ -0.25
VPREB3-201ENST00000248948 EEF1GP26641 437 aaKnown RBP13.48□□□□□ -0.25
VPREB3-201ENST00000248948 CTHP32929 405 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 PSEN1P49768 467 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF132P52740 706 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
VPREB3-201ENST00000248948 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 STILQ15468 1287 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 STX1AQ16623 288 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 GOLGA7BQ2TAP0 167 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 ITPRIPL2Q3MIP1 535 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 HECTD3Q5T447 861 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 TMEM270Q6UE05 265 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 ANKRD52Q8NB46 1076 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 DTWD2Q8NBA8 298 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 SH3RF2Q8TEC5 729 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 OSCP1Q8WVF1 389 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 ATP2A3Q93084 1043 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 ZFYVE19Q96K21 471 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 HESX1Q9UBX0 185 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
VPREB3-201ENST00000248948 SPECC1L-ADORA2AF8WAN1 911 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 XPO1O14980 1071 aaKnown RBP13.47□□□□□ -0.25
VPREB3-201ENST00000248948 PI15O43692 258 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 CD19P15391 556 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 PLA2G5P39877 138 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
VPREB3-201ENST00000248948 KPNA1P52294 538 aaPredicted RBP13.47□□□□□ -0.25
VPREB3-201ENST00000248948 KIF11P52732 1056 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 TCF15Q12870 199 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 MEA1Q16626 185 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 TTC30AQ86WT1 665 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 CPA6Q8N4T0 437 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
VPREB3-201ENST00000248948 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
VPREB3-201ENST00000248948 FAM3CQ92520 227 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 KAT5Q92993 513 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 CLDN23Q96B33 292 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 KREMEN1Q96MU8 473 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 HPS4Q9NQG7 708 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 ANO10Q9NW15 660 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 GTSE1Q9NYZ3 720 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 APEX2Q9UBZ4 518 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 CNTN6Q9UQ52 1028 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 CPQQ9Y646 472 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 USP3Q9Y6I4 520 aa13.47□□□□□ -0.25
VPREB3-201ENST00000248948 FAM170BA6NMN3 283 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 KCNJ18B7U540 433 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 LEFTY2O00292 366 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
VPREB3-201ENST00000248948 CYP26A1O43174 497 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 COCHO43405 550 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 TLR5O60602 858 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 ABL1P00519 1130 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.25
VPREB3-201ENST00000248948 PLA2G4AP47712 749 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 IFNAR2P48551 515 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 AMPD2Q01433 879 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 TNK2Q07912 1038 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 RUNX3Q13761 415 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 EXOC3L4Q17RC7 722 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 LCLAT1Q6UWP7 414 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 TADA2BQ86TJ2 420 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 PIGZQ86VD9 579 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 ARHGAP18Q8N392 663 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.25
VPREB3-201ENST00000248948 CDK5RAP1Q96SZ6 601 aaKnown RBP13.46□□□□□ -0.25
VPREB3-201ENST00000248948 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 NDST4Q9H3R1 872 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 GKN1Q9NS71 199 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 DUS2Q9NX74 493 aaKnown RBP13.46□□□□□ -0.25
VPREB3-201ENST00000248948 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
VPREB3-201ENST00000248948 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPREB3-201ENST00000248948 NFATC1O95644 943 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 DCNP07585 359 aaKnown RBP13.45□□□□□ -0.26
VPREB3-201ENST00000248948 CD72P21854 359 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 MFAP3P55082 362 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 ZXDBP98169 803 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 NHLH1Q02575 133 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 PDE4CQ08493 712 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms