RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TEX12Q9BXU0 123 aa20.52■□□□□ 0.88
SOX4-201ENST00000244745 SMIM22K7EJ46 135 aa20.52■□□□□ 0.88
SOX4-201ENST00000244745 PMPCBO75439 489 aa20.52■□□□□ 0.88
SOX4-201ENST00000244745 LSM8O95777 96 aaKnown RBP20.52■□□□□ 0.88
SOX4-201ENST00000244745 FAM83EQ2M2I3 478 aa20.52■□□□□ 0.88
SOX4-201ENST00000244745 ZC3H12BQ5HYM0 836 aaKnown RBP20.52■□□□□ 0.88
SOX4-201ENST00000244745 TAGAPQ8N103 731 aa20.52■□□□□ 0.88
SOX4-201ENST00000244745 TDRD5Q8NAT2 981 aaKnown RBP20.52■□□□□ 0.88
SOX4-201ENST00000244745 MTMR9Q96QG7 549 aa20.52■□□□□ 0.88
SOX4-201ENST00000244745 ABT1Q9ULW3 272 aaKnown RBP20.52■□□□□ 0.88
SOX4-201ENST00000244745 NME5P56597 212 aa20.52■□□□□ 0.87
SOX4-201ENST00000244745 WDR49Q8IV35 697 aa20.52■□□□□ 0.87
SOX4-201ENST00000244745 TAS2R14Q9NYV8 317 aa20.52■□□□□ 0.87
SOX4-201ENST00000244745 PKP3Q9Y446 797 aa20.52■□□□□ 0.87
SOX4-201ENST00000244745 ADGRA3Q8IWK6 1321 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 KLRC4O43908 158 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 DLGAP3O95886 979 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 STRA8Q7Z7C7 330 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 C4orf19Q8IY42 314 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 LRRC4BQ9NT99 713 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 PCDHGB4Q9UN71 923 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 MTSS1O43312 755 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 RHOBTB1O94844 696 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 RALBP11234 206 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 PTPN7P35236 360 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 UBE3AQ05086 875 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 MYBPC2Q14324 1141 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 STYK1Q6J9G0 422 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 MRGBPQ9NV56 204 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 PECAM1P16284 738 aaPredicted RBP20.51■□□□□ 0.87
SOX4-201ENST00000244745 DEFA1P59665 94 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 DEFA3P59666 94 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 IRGCQ6NXR0 463 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 ZSWIM2Q8NEG5 633 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 INPP5DQ92835 1189 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 SGO1Q5FBB7 561 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 THEMIS2Q5TEJ8 643 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 TRAF7Q6Q0C0 670 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 ACTL9Q8TC94 416 aa20.51■□□□□ 0.87
SOX4-201ENST00000244745 EN1Q05925 392 aaPredicted RBP20.5■□□□□ 0.87
SOX4-201ENST00000244745 TRMT5Q32P41 509 aaKnown RBP20.5■□□□□ 0.87
SOX4-201ENST00000244745 AASDHQ4L235 1098 aaPredicted RBP20.5■□□□□ 0.87
SOX4-201ENST00000244745 TTC30BQ8N4P2 665 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 TRAPPC9Q96Q05 1148 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 ZC3H4Q9UPT8 1303 aaKnown RBP20.5■□□□□ 0.87
SOX4-201ENST00000244745 USP1O94782 785 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 STX5Q13190 355 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 NOTUMQ6P988 496 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 GDPD5Q8WTR4 605 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 TMEM150BA6NC51 233 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 ELK3P41970 407 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 TAF6P49848 677 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 C1QBPQ07021 282 aaKnown RBP20.5■□□□□ 0.87
SOX4-201ENST00000244745 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 PPP2R3CQ969Q6 453 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 PGM2Q96G03 612 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 WDCPQ9H6R7 721 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 TRPC7Q9HCX4 862 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 CHST7Q9NS84 486 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 ALBP02768 609 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 MAPTP10636 758 aaKnown RBP20.5■□□□□ 0.87
SOX4-201ENST00000244745 IRF1P10914 325 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 SSTR1P30872 391 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 UNC45BQ8IWX7 931 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 VGLL2Q8N8G2 317 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 RXFP2Q8WXD0 754 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 KLHL25Q9H0H3 589 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 CYP39A1Q9NYL5 469 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 SNX13Q9Y5W8 968 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 CBX6O95503 412 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 SEL1L3Q68CR1 1132 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 SNX31Q8N9S9 440 aa20.5■□□□□ 0.87
SOX4-201ENST00000244745 GJB6O95452 261 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
SOX4-201ENST00000244745 CYP2C8P10632 490 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 CLCN3P51790 818 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 PPATQ06203 517 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 CD302Q8IX05 232 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 OXNAD1Q96HP4 312 aaPredicted RBP20.49■□□□□ 0.87
SOX4-201ENST00000244745 MUC3BQ9H195 1237 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 DDX18Q9NVP1 670 aaKnown RBP20.49■□□□□ 0.87
SOX4-201ENST00000244745 AP4E1Q9UPM8 1137 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 EML1O00423 815 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 FKBP9O95302 570 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 IL1R1P14778 569 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 PSMA4P25789 261 aaKnown RBP20.49■□□□□ 0.87
SOX4-201ENST00000244745 CASP5P51878 434 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 FKBP9P1Q75LS8 142 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 SH3KBP1Q96B97 665 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 DCUN1D1Q96GG9 259 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 TMEM176AQ96HP8 235 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 EFCAB1Q9HAE3 211 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 CYP4F12Q9HCS2 524 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 PRDM5Q9NQX1 630 aaPredicted RBP20.49■□□□□ 0.87
SOX4-201ENST00000244745 DDIT4Q9NX09 232 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 APPL1Q9UKG1 709 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 ANXA9O76027 345 aa20.49■□□□□ 0.87
SOX4-201ENST00000244745 STAG3L1P0CL83 205 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms