RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SIRPGQ9P1W8 387 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 H0Y3Z8 333 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 NDC80O14777 642 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 CST8O60676 142 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 PSMG1O95456 288 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 KCNA3P22001 575 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 ARL4CP56559 192 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 IRX4P78413 519 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 MRPS35P82673 323 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 AZIN2Q96A70 460 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 TSSK1BQ9BXA7 367 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 IMPG2Q9BZV3 1241 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
SEC61A1-201ENST00000243253 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 APOC2P02655 101 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CDH8P55286 799 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 SNX30Q5VWJ9 437 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 SLFN12LQ6IEE8 588 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 MICAL1Q8TDZ2 1067 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CPXM1Q96SM3 734 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 BCO2Q9BYV7 579 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 NMUR2Q9GZQ4 415 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CPSF3Q9UKF6 684 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 E2F8A0AVK6 867 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CXorf49A8MYA2 514 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 KIF3CO14782 793 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 PRKCHP24723 683 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ELK3P41970 407 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 SATB1Q01826 763 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CDK18Q07002 472 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 AP1B1Q10567 949 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 Q3C1V9 767 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 RFX8Q6ZV50 586 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ZNF534Q76KX8 674 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 SHKBP1Q8TBC3 707 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 OXNAD1Q96HP4 312 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 XPO7Q9UIA9 1087 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 MTO1Q9Y2Z2 717 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 TRIP11Q15643 1979 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 MAGEC1O60732 1142 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ERBB2P04626 1255 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 BGNP21810 368 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 AMPD1P23109 780 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ICAM3P32942 547 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CPOXP36551 454 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 VHLP40337 213 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 TRPC3Q13507 836 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 FAXCQ5TGI0 409 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 IRGCQ6NXR0 463 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 RNF111Q6ZNA4 994 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 APBB1IPQ7Z5R6 666 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 ALYREFQ86V81 257 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 SCG3Q8WXD2 468 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 SLC7A3Q8WY07 619 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 HSPH1Q92598 858 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 MTMR12Q9C0I1 747 aa12.47□□□□□ -0.41
SEC61A1-201ENST00000243253 FAM237BA0A1B0GVD1 139 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 AHCYL1O43865 530 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 AVILO75366 819 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 SLC34A1Q06495 639 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 RCN1Q15293 331 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 ZC3H18Q86VM9 953 aaKnown RBP12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 C7orf26Q96N11 449 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 SDCBP2Q9H190 292 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 PIH1D1Q9NWS0 290 aaKnown RBP12.46□□□□□ -0.41
SEC61A1-201ENST00000243253 CFAP69A5D8W1 941 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 KBTBD13C9JR72 458 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 OATP04181 439 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 PYGBP11216 843 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 PIM1P11309 404 aaPredicted RBP12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 PHBP35232 272 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 TRIM68Q6AZZ1 485 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 MYLK4Q86YV6 388 aaPredicted RBP12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 OTUD5Q96G74 571 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 FAM111AQ96PZ2 611 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF180Q9UJW8 692 aa12.46□□□□□ -0.42
SEC61A1-201ENST00000243253 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 ADCY3O60266 1144 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 HAUS5O94927 633 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 TRUB2O95900 331 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 TMEM132BQ14DG7 1078 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 NOMO1Q15155 1222 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 AMHR2Q16671 573 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 ZPBP2Q6X784 338 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms