RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PCGF5Q86SE9 256 aa24.33■■□□□ 1.48
MSX2-201ENST00000239243 ZCCHC9Q8N567 271 aaKnown RBP24.33■■□□□ 1.48
MSX2-201ENST00000239243 SENP8Q96LD8 212 aa24.33■■□□□ 1.48
MSX2-201ENST00000239243 TMEM121Q9BTD3 319 aa24.33■■□□□ 1.48
MSX2-201ENST00000239243 SRRDQ9UH36 339 aa24.33■■□□□ 1.48
MSX2-201ENST00000239243 NOVA2Q9UNW9 492 aaKnown RBP24.33■■□□□ 1.48
MSX2-201ENST00000239243 GRIN2DO15399 1336 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 LCP1P13796 627 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 IRAK1P51617 712 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 GNGT1P63211 74 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 GPS1Q13098 491 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 MORF4L2Q15014 288 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 WSCD1Q658N2 575 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 SCYL2Q6P3W7 929 aa24.32■■□□□ 1.48
MSX2-201ENST00000239243 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.32■■□□□ 1.48
MSX2-201ENST00000239243 TTC4O95801 387 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 SKIP12755 728 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 CD52P31358 61 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 ATP1A2P50993 1020 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 DPYSL3Q14195 570 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 AGMOQ6ZNB7 445 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 DDX20Q9UHI6 824 aaKnown RBP24.31■■□□□ 1.48
MSX2-201ENST00000239243 SQORQ9Y6N5 450 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 THSD7BQ9C0I4 1608 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 ZNF487B1APH4 448 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 AOC2O75106 756 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 NPR3P17342 541 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 HPDP32754 393 aaPredicted RBP24.31■■□□□ 1.48
MSX2-201ENST00000239243 CDR1P51861 262 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 ITGA7Q13683 1181 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 FUKQ8N0W3 1084 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 RSAD2Q8WXG1 361 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 LPPQ93052 612 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 TLCD1Q96CP7 247 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 PGBD4Q96DM1 585 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 CFHR5Q9BXR6 569 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 UBN1Q9NPG3 1134 aa24.31■■□□□ 1.48
MSX2-201ENST00000239243 CAND2O75155 1236 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 IVLP07476 585 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 GHRP10912 638 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 ZSCAN26Q16670 478 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 MAP3K21Q5TCX8 1036 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 DSTYKQ6XUX3 929 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 CAPNS2Q96L46 248 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 RNF157Q96PX1 679 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 ADAM7Q9H2U9 754 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 DDX43Q9NXZ2 648 aaKnown RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 SHOC2Q9UQ13 582 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 EIF3HO15372 352 aaKnown RBP eCLIP24.3■■□□□ 1.48
MSX2-201ENST00000239243 RGS16O15492 202 aaPredicted RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 IFNB1P01574 187 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 TKTP29401 623 aaKnown RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 SCNN1GP51170 649 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 CLCNKBP51801 687 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 EIF3EP60228 445 aaKnown RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 PPP2R2AP63151 447 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 FAM26DQ5JW98 314 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 PIGZQ86VD9 579 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 GLIS1Q8NBF1 620 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 KCTD13Q8WZ19 329 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 CENPIQ92674 756 aaPredicted RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 P3H4Q92791 437 aa24.3■■□□□ 1.48
MSX2-201ENST00000239243 C11orf84Q9BUA3 381 aaPredicted RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 SAE1Q9UBE0 346 aaPredicted RBP24.3■■□□□ 1.48
MSX2-201ENST00000239243 A0A0U1RQF3 1178 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 RASGRF2O14827 1237 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 PAX3P23760 479 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 HDAC4P56524 1084 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 MAGOHP61326 146 aaKnown RBP24.29■■□□□ 1.48
MSX2-201ENST00000239243 CAP1Q01518 475 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 DSC3Q14574 896 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 PRUNE1Q86TP1 453 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 SPATA18Q8TC71 538 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 ZNF670Q9BS34 389 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 DDX23Q9BUQ8 820 aaKnown RBP24.29■■□□□ 1.48
MSX2-201ENST00000239243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.29■■□□□ 1.48
MSX2-201ENST00000239243 AGTP01019 485 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 ZSCAN5DPP0CG00 497 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 MDH1P40925 334 aaKnown RBP24.29■■□□□ 1.48
MSX2-201ENST00000239243 LPIN1Q14693 890 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 DEFB115Q30KQ5 88 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 MED10Q9BTT4 135 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 SNRNP25Q9BV90 132 aaKnown RBP24.29■■□□□ 1.48
MSX2-201ENST00000239243 MIOSQ9NXC5 875 aa24.29■■□□□ 1.48
MSX2-201ENST00000239243 TLDC2A0PJX2 215 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 ACSL3O95573 720 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 TGM2P21980 687 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 ACAT1P24752 427 aaKnown RBP24.28■■□□□ 1.48
MSX2-201ENST00000239243 STIP1P31948 543 aaKnown RBP24.28■■□□□ 1.48
MSX2-201ENST00000239243 ACLYP53396 1101 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 NOMO1Q15155 1222 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 ERMARDQ5T6L9 678 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 LRRC31Q6UY01 552 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 STRADAQ7RTN6 431 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 CLEC4CQ8WTT0 213 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 RBM15Q96T37 977 aaKnown RBP eCLIP24.28■■□□□ 1.48
MSX2-201ENST00000239243 CNOT10Q9H9A5 744 aaKnown RBP24.28■■□□□ 1.48
MSX2-201ENST00000239243 PCDH18Q9HCL0 1135 aa24.28■■□□□ 1.48
MSX2-201ENST00000239243 SMAPO00193 183 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 ATP2C2O75185 946 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms