RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 ZDHHC5Q9C0B5 715 aa8.93□□□□□ -0.98
IFT43-201ENST00000238628 CCSER1Q9C0I3 900 aa8.93□□□□□ -0.98
IFT43-201ENST00000238628 FAM124BQ9H5Z6 455 aaPredicted RBP8.93□□□□□ -0.98
IFT43-201ENST00000238628 TMEM206Q9H813 350 aa8.93□□□□□ -0.98
IFT43-201ENST00000238628 PARVGQ9HBI0 331 aa8.93□□□□□ -0.98
IFT43-201ENST00000238628 AGO2Q9UKV8 859 aaKnown RBP8.93□□□□□ -0.98
IFT43-201ENST00000238628 FARP1Q9Y4F1 1045 aaPredicted RBP8.93□□□□□ -0.98
IFT43-201ENST00000238628 MYO18AQ92614 2054 aaKnown RBP8.93□□□□□ -0.98
IFT43-201ENST00000238628 COL12A1Q99715 3063 aa8.93□□□□□ -0.98
IFT43-201ENST00000238628 HELZP42694 1942 aaKnown RBP8.92□□□□□ -0.98
IFT43-201ENST00000238628 ANTXRLA6NF34 631 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 TADA3O75528 432 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 NOL4O94818 638 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 NFATC1O95644 943 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 HNRNPLP14866 589 aaKnown RBP eCLIP8.92□□□□□ -0.98
IFT43-201ENST00000238628 GNSP15586 552 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 ABCD1P33897 745 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 ATP2C1P98194 919 aaPredicted RBP8.92□□□□□ -0.98
IFT43-201ENST00000238628 GTF2BQ00403 316 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 MYL7Q01449 175 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 GRIK2Q13002 908 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 TMEM119Q4V9L6 283 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 RILPL1Q5EBL4 403 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 MCTP1Q6DN14 999 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 GPBP1Q86WP2 473 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 TMPRSS12Q86WS5 348 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 TRIML1Q8N9V2 468 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
IFT43-201ENST00000238628 SH3RF2Q8TEC5 729 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 LRRC15Q8TF66 581 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 LEO1Q8WVC0 666 aaPredicted RBP8.92□□□□□ -0.98
IFT43-201ENST00000238628 CALML4Q96GE6 196 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 TRMT2BQ96GJ1 504 aaKnown RBP8.92□□□□□ -0.98
IFT43-201ENST00000238628 MYRFLQ96LU7 910 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 HSPA12BQ96MM6 686 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 ZNF560Q96MR9 790 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 TM7SF3Q9NS93 570 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 DDX43Q9NXZ2 648 aaKnown RBP8.92□□□□□ -0.98
IFT43-201ENST00000238628 SUSD2Q9UGT4 822 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 GTF3C4Q9UKN8 822 aa8.92□□□□□ -0.98
IFT43-201ENST00000238628 MGAQ8IWI9 3026 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 TCRBV21S2A2A0A5A6 115 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 C2orf78A6NCI8 922 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 MYMKA6NI61 221 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 TISP43B9A030 160 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 FLRT2O43155 660 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 TNFSF14O43557 240 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 EIF5BO60841 1220 aaKnown RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 HUS1O60921 280 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 IL18RAPO95256 599 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 KLF8O95600 359 aaPredicted RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 ACAT1P24752 427 aaKnown RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 OPRD1P41143 372 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 PNPLA4P41247 253 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 ZNF131P52739 623 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 RIPPLY3P57055 190 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 TMPRSS3P57727 454 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 POU5F1Q01860 360 aaKnown RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 USP4Q13107 963 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 SERINC3Q13530 473 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 KCNB1Q14721 858 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 ZC2HC1CQ53FD0 456 aaPredicted RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 INTS6LQ5JSJ4 861 aaKnown RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 C6orf132Q5T0Z8 1188 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 SYCP2LQ5T4T6 812 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 BROXQ5VW32 411 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 NT5DC4Q86YG4 428 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 SLC41A1Q8IVJ1 513 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 SCN4BQ8IWT1 228 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 PDCL2Q8N4E4 241 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 ALLCQ8N6M5 410 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 TXNDC5Q8NBS9 432 aaKnown RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 BAHD1Q8TBE0 780 aaPredicted RBP8.91□□□□□ -0.98
IFT43-201ENST00000238628 TMEM176AQ96HP8 235 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 GAREM1Q9H706 876 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 IL21RQ9HBE5 538 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 CPNE5Q9HCH3 593 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 ABCB6Q9NP58 842 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 GCNT4Q9P109 453 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 AGAP1Q9UPQ3 857 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 STYXL1Q9Y6J8 313 aa8.91□□□□□ -0.98
IFT43-201ENST00000238628 C2CD3Q4AC94 2353 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 SGK1O00141 431 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 SLC26A4O43511 780 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 TBCAO75347 108 aaKnown RBP8.9□□□□□ -0.98
IFT43-201ENST00000238628 ITGB3P05106 788 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 ZNF883P0CG24 379 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 TCF3P15923 654 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 POLR2BP30876 1174 aaKnown RBP8.9□□□□□ -0.98
IFT43-201ENST00000238628 TIE1P35590 1138 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 HNF1BP35680 557 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 UBA7P41226 1012 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 MATKP42679 507 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 SLC6A11P48066 632 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 LHX1P48742 406 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 PDE6CP51160 858 aa8.9□□□□□ -0.98
IFT43-201ENST00000238628 TFAMQ00059 246 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms