RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PDIK1LQ8N165 341 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 NPLOC4Q8TAT6 608 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 GRAMD1AQ96CP6 724 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 RTP4Q96DX8 246 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 EIF2AQ9BY44 585 aaKnown RBP16.89■□□□□ 0.29
UBE3D-201ENST00000237186 FGFR1OP2Q9NVK5 253 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 SLC5A4Q9NY91 659 aa16.89■□□□□ 0.29
UBE3D-201ENST00000237186 PSMC3IPQ9P2W1 217 aaPredicted RBP16.89■□□□□ 0.29
UBE3D-201ENST00000237186 POC1B-GALNT4F8VUJ3 575 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PPEF2O14830 753 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 MDM4O15151 490 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 GABBR2O75899 941 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 DNAJC8O75937 253 aaPredicted RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TMEM63AO94886 807 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TGM2P21980 687 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 GEMIN4P57678 1058 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 ADAM17P78536 824 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 ROR1Q01973 937 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 MMRN1Q13201 1228 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 XKR4Q5GH76 650 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 NUGGCQ68CJ6 796 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SLC9A4Q6AI14 798 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 ADGRD1Q6QNK2 874 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 CRYBG2Q8N1P7 616 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 FAF2Q96CS3 445 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 WDR83Q9BRX9 315 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TRABDQ9H4I3 376 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 ACSS3Q9H6R3 686 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 USP29Q9HBJ7 922 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 CYLDQ9NQC7 956 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 HESX1Q9UBX0 185 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PRKAG3Q9UGI9 489 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 UBQLN1Q9UMX0 589 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SLC12A4Q9UP95 1085 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TCRBV7S3A2A0A539 114 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 GOLGA8MH3BSY2 632 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PIRO00625 290 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PAPSS1O43252 624 aaPredicted RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SUN1O94901 812 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SMIM10L2AP0DMW4 78 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SMIM10L2BP0DMW5 78 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TAC1P20366 129 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SDC4P31431 198 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 GAD2Q05329 585 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 RNASELQ05823 741 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 XRCC4Q13426 336 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SOWAHAQ2M3V2 549 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 KLHL38Q2WGJ6 581 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 RAB6CQ53S08 254 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 HP1BP3Q5SSJ5 553 aaPredicted RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 LIMS2Q7Z4I7 341 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PLD5Q8N7P1 536 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TGS1Q96RS0 853 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 C11orf84Q9BUA3 381 aaPredicted RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 RAB6CQ9H0N0 254 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TMEM51Q9NW97 253 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 TUBGCP4Q9UGJ1 667 aa16.88■□□□□ 0.29
UBE3D-201ENST00000237186 XPO7Q9UIA9 1087 aaKnown RBP16.88■□□□□ 0.29
UBE3D-201ENST00000237186 PLXNB2O15031 1838 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 BCLAF3A2AJT9 711 aaKnown RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 CFAP69A5D8W1 941 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 TYROBPO43914 113 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 CD4P01730 458 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 KRT15P19012 456 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 HNRNPH1P31943 449 aaKnown RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 PTPN9P43378 593 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 RGS7P49802 495 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 PDE4CQ08493 712 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 MTFR1Q15390 333 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 PKN2Q16513 984 aaKnown RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 SPRYD7Q5W111 196 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 DARS2Q6PI48 645 aaKnown RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 NPNTQ6UXI9 565 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 ANKMY2Q8IV38 441 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 PQLC3Q8N755 202 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 ANKRD52Q8NB46 1076 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 ZNF670Q9BS34 389 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 FRMD8Q9BZ67 464 aaPredicted RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 FAM49AQ9H0Q0 323 aaPredicted RBP16.87■□□□□ 0.29
UBE3D-201ENST00000237186 PCDH18Q9HCL0 1135 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 MLXIPLQ9NP71 852 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 GDAP2Q9NXN4 497 aa16.87■□□□□ 0.29
UBE3D-201ENST00000237186 PIK3R2O00459 728 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 CHADO15335 359 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 DYNC1LI2O43237 492 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-201ENST00000237186 GRAP2O75791 330 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-201ENST00000237186 DESP17661 470 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 TMEM62Q0P6H9 643 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 SPARCL1Q14515 664 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 KRT81Q14533 505 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 KCNJ11Q14654 390 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 GALNTL6Q49A17 601 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 SLC26A9Q7LBE3 791 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms