RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
LSM5-201ENST00000223084 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 TTC8Q8TAM2 541 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 OVCA2Q8WZ82 227 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 LSM14BQ9BX40 385 aaKnown RBP13.38□□□□□ -0.27
LSM5-201ENST00000223084 FBXO44Q9H4M3 255 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 CCSER2Q9H7U1 834 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 PNPLA8Q9NP80 782 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 DNAJC12Q9UKB3 198 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 KIAA1257Q9ULG3 409 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 CNTN6Q9UQ52 1028 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 SCML2Q9UQR0 700 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
LSM5-201ENST00000223084 A0A1W2PQH9 124 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 M0QYV0 167 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 ARNTLO00327 626 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 CHADO15335 359 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 COCHO43405 550 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 PI15O43692 258 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 ZDHHC11BP0C7U3 371 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 MBL2P11226 248 aaPredicted RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 ZNF18P17022 549 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 PTMSP20962 102 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 CD72P21854 359 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 KLK7P49862 253 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 COPB1P53618 953 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 BCAT1P54687 386 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 FCHO2Q0JRZ9 810 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 BST2Q10589 180 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 ZNF268Q14587 947 aaPredicted RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 CNGA2Q16280 664 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 HECTD3Q5T447 861 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 TRIM68Q6AZZ1 485 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 LCLAT1Q6UWP7 414 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 TPRG1Q6ZUI0 275 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 ENOSF1Q7L5Y1 443 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 SH3RF2Q8TEC5 729 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 NDRG1Q92597 394 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 IRF7Q92985 503 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 FOXQ1Q9C009 403 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 NMUR1Q9HB89 426 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 GKN1Q9NS71 199 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 OSER1Q9NX31 292 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 LIMA1Q9UHB6 759 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
LSM5-201ENST00000223084 FHOD1Q9Y613 1164 aa13.37□□□□□ -0.27
LSM5-201ENST00000223084 HELZP42694 1942 aaKnown RBP13.37□□□□□ -0.27
LSM5-201ENST00000223084 KIF26AQ9ULI4 1882 aaPredicted RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 LEFTY2O00292 366 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 SCAMP3O14828 347 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 XPO1O14980 1071 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 OLFM2O95897 454 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 TBX18O95935 607 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 ATP1A3P13637 1013 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 RFX1P22670 979 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 RGS7P49802 495 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 SLC8A3P57103 927 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 SLC7A9P82251 487 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 TNK2Q07912 1038 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 USP4Q13107 963 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 MTF1Q14872 753 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 ZNF77Q15935 545 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 ARHGAP29Q52LW3 1261 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 KLHDC7AQ5VTJ3 777 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 SNX30Q5VWJ9 437 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 ASTLQ6HA08 431 aaPredicted RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 SCD5Q86SK9 330 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 TMEM105Q8N8V8 129 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 SHC3Q92529 594 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 DNASE1L2Q92874 299 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 SECISBP2LQ93073 1101 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 UBXN6Q9BZV1 441 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 KIF9Q9HAQ2 790 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 TLR8Q9NR97 1041 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 THG1LQ9NWX6 298 aaKnown RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 NUDT5Q9UKK9 219 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 ARHGAP26Q9UNA1 814 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 ARIH1Q9Y4X5 557 aaPredicted RBP13.36□□□□□ -0.27
LSM5-201ENST00000223084 CPQQ9Y646 472 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 COL4A2P08572 1712 aa13.36□□□□□ -0.27
LSM5-201ENST00000223084 MUC6Q6W4X9 2439 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 SHISA7A6NL88 538 aa13.35□□□□□ -0.27
LSM5-201ENST00000223084 FOXN3O00409 490 aaPredicted RBP13.35□□□□□ -0.27
LSM5-201ENST00000223084 PIK3R2O00459 728 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms