RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TMEM119Q4V9L6 283 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TTC27Q6P3X3 843 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 FKBP9P1Q75LS8 142 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SPATA2LQ8IUW3 424 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 ULK2Q8IYT8 1036 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SHCBP1Q8NEM2 672 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PARD3BQ8TEW8 1205 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 STK32AQ8WU08 396 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 S100ZQ8WXG8 99 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 NRDE2Q9H7Z3 1164 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 HMG20AQ9NP66 347 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PKP3Q9Y446 797 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 COMMD3-BMI1R4GMX3 469 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ADAMTS13Q76LX8 1427 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SF3B1O75533 1304 aaKnown RBP eCLIP4.56□□□□□ -1.689e-6■■■■■ 68.9
CHD9-201ENST00000219084 FAM205AQ6ZU69 1335 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 MAST2Q6P0Q8 1798 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 A0A087WXM4 84 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 PDE9AO76083 593 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TGFB3P10600 412 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 VDRP11473 427 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 MCCD1P59942 119 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 PPARDQ03181 441 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RIPK1Q13546 671 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 LBRQ14739 615 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 MFSD14CQ5VZR4 134 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 DCP1BQ8IZD4 617 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 CPA5Q8WXQ8 436 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ASIC4Q96FT7 647 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 WNK4Q96J92 1243 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 UGT2B28Q9BY64 529 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CDC42EP4Q9H3Q1 356 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 DBNDD1Q9H9R9 158 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 FANCEQ9HB96 536 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 DDX28Q9NUL7 540 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 PCSK1NQ9UHG2 260 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 USP18Q9UMW8 372 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 MROH7Q68CQ1 1323 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CYBBP04839 570 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CYP11B2P19099 503 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CASP1P29466 404 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 HNRNPH3P31942 346 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 CPT1AP50416 773 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 NUDT2P50583 147 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RENBPP51606 427 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ZNF844Q08AG5 666 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 KCNMA1Q12791 1236 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 NDUFA5Q16718 116 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ZC3H12BQ5HYM0 836 aaKnown RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 PLA2G4FQ68DD2 849 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 LRRC34Q8IZ02 419 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 HPDLQ96IR7 371 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SYTL2Q9HCH5 934 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 MLXIPLQ9NP71 852 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TUBA8Q9NY65 449 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 PIM2Q9P1W9 311 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CORO1CQ9ULV4 474 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 SUPT3HB4E1H0 165 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 TRIM49D1C9J1S8 452 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 H3BQF6 201 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CRTAMO95727 393 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 FAM200BP0CF97 657 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RBP3P10745 1247 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 ENO3P13929 434 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 RASA1P20936 1047 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 NME3Q13232 169 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PREPLQ4J6C6 727 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 ANKMY2Q8IV38 441 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 P3H2Q8IVL5 708 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 DNERQ8NFT8 737 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 AFG1LQ8WV93 481 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 SPIRE2Q8WWL2 714 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 EXT2Q93063 718 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 OXNAD1Q96HP4 312 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 PAFAH2Q99487 392 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 RIOX1Q9H6W3 641 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 IMPAD1Q9NX62 359 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 MYRFQ9Y2G1 1151 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 CAB39Q9Y376 341 aaPredicted RBP4.56□□□□□ -1.68
CHD9-201ENST00000219084 RGPD5Q99666 1765 aa4.56□□□□□ -1.68
CHD9-201ENST00000219084 PP2D1A8MPX8 630 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 LZTS3O60299 673 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 SNAP91O60641 907 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 GH1P01241 217 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 ITGAVP06756 1048 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 ANXA6P08133 673 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 MYBP10242 640 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 SERPINB5P36952 375 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 HPCAP84074 193 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 PRKCEQ02156 737 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 SYTL3Q4VX76 610 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 KHDRBS2Q5VWX1 349 aaKnown RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 ST13P5Q8NFI4 369 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 REPS1Q96D71 796 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 ZBTB10Q96DT7 871 aa4.55□□□□□ -1.68
CHD9-201ENST00000219084 RMND5BQ96G75 393 aaPredicted RBP4.55□□□□□ -1.68
CHD9-201ENST00000219084 PLEKHA8Q96JA3 519 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms