RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ACVR2BQ13705 512 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 TTC1Q99614 292 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 APOL2Q9BQE5 337 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 NT5C1AQ9BXI3 368 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 RNPEPL1Q9HAU8 725 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 SLC12A4Q9UP95 1085 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 CLDN5O00501 218 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 KITP10721 976 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 RBP5P82980 135 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 GCNT1Q02742 428 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 ITKQ08881 620 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 MAP7Q14244 749 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 C6orf163Q5TEZ5 329 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 PLEKHH3Q7Z736 793 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 CTU1Q7Z7A3 348 aaKnown RBP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 AGR3Q8TD06 166 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 NMD3Q96D46 503 aaKnown RBP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 PREBQ9HCU5 417 aa13.47□□□□□ -0.25
PCDHB4-201ENST00000194152 KIAA1551Q9HCM1 1747 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 LYPLA2O95372 231 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 TGFB3P10600 412 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 SSTR1P30872 391 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 NOMO3P69849 1222 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 AP1B1Q10567 949 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 TRIM42Q8IWZ5 723 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 EIF2AQ9BY44 585 aaKnown RBP13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 MROH8Q9H579 483 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 MAFBQ9Y5Q3 323 aaPredicted RBP13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 SCAMP3O14828 347 aaKnown RBP13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 MAP3K7O43318 606 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 HNRNPRO43390 633 aaKnown RBP13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 ANXA13P27216 316 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 TNFRSF8P28908 595 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 GPR142Q7Z601 462 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 DNAAF3Q8N9W5 541 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 FBXO41Q8TF61 875 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 EDEM1Q92611 657 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 RMDN2Q96LZ7 410 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 CPXM1Q96SM3 734 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 DNAI2Q9GZS0 605 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 TUBGCP4Q9UGJ1 667 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 PCDHA3Q9Y5H8 950 aa13.46□□□□□ -0.25
PCDHB4-201ENST00000194152 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 C5orf60A6NFR6 353 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 KIAA0391O15091 583 aaKnown RBP13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 RECQL4O94761 1208 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 FAM200BP0CF97 657 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 EML3Q32P44 896 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 PTPN20Q4JDL3 420 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 CCDC62Q6P9F0 684 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 GLIS1Q8NBF1 620 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 STK32AQ8WU08 396 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.26
PCDHB4-201ENST00000194152 ANKRD33BA6NCL7 494 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 SUPT3HO75486 399 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 SURF1Q15526 300 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 C1orf127Q8N9H9 656 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 A0A0A6YYK5 440 aaPredicted RBP13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 MICAL2O94851 1124 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 HMBSP08397 361 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 SERPINB3P29508 390 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 ABCD1P33897 745 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 WDR49Q8IV35 697 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 MAP7D3Q8IWC1 876 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 DCLK2Q8N568 766 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 MAML1Q92585 1016 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 TREHO43280 583 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 B3GAT3O94766 335 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 ACO1P21399 889 aaKnown RBP13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 ARL2P36404 184 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 PDE1BQ01064 536 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 PDE1CQ14123 709 aaPredicted RBP13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 C11orf63Q6NUN7 778 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 UBP1Q9NZI7 540 aa13.45□□□□□ -0.26
PCDHB4-201ENST00000194152 C10orf71Q711Q0 1435 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 CFAP69A5D8W1 941 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 THPOP40225 353 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 MAGEA4P43358 317 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 MYBPC2Q14324 1141 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 SNX30Q5VWJ9 437 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 ZNF662Q6ZS27 426 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 STKLD1Q8NE28 680 aa13.44□□□□□ -0.26
PCDHB4-201ENST00000194152 BRI3BPQ8WY22 251 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms