RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 SMARCD1Q96GM5 515 aa16.35■□□□□ 0.21
LAPTM4A-201ENST00000175091 SMOQ99835 787 aa16.35■□□□□ 0.21
LAPTM4A-201ENST00000175091 TMEM30AQ9NV96 361 aa16.35■□□□□ 0.21
LAPTM4A-201ENST00000175091 PCDHB8Q9UN66 801 aa16.35■□□□□ 0.21
LAPTM4A-201ENST00000175091 HSF2BPO75031 334 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 AP1G2O75843 785 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 CXCL10P02778 98 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 DESP17661 470 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 KDELR1P24390 212 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 ATP11AP98196 1134 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 KAZNQ674X7 775 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 SLC39A5Q6ZMH5 540 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 ZMIZ2Q8NF64 920 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 OR10T2Q8NGX3 314 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 GRK7Q8WTQ7 553 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 NCAPGQ9BPX3 1015 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 TRIM31Q9BZY9 425 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 HIPK3Q9H422 1215 aa16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 NGRNQ9NPE2 291 aaKnown RBP16.34■□□□□ 0.21
LAPTM4A-201ENST00000175091 LTBP2Q14767 1821 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 PRPSAP2O60256 369 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 DAB1O75553 588 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 ENDOD1O94919 500 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 CD48P09326 243 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 CACNA2D1P54289 1103 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 HDAC4P56524 1084 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 MRPS5P82675 430 aaKnown RBP16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 KRT17Q04695 432 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 FAAP100Q0VG06 881 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 SNX1Q13596 522 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 RAB41Q5JT25 222 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 EFHC1Q5JVL4 640 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 SYDE1Q6ZW31 735 aaPredicted RBP16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 CRIPAKQ8N1N5 446 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 TEKT4Q8WW24 435 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 CENPIQ92674 756 aaPredicted RBP16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 SCLYQ96I15 445 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 ZNF333Q96JL9 665 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 TOX2Q96NM4 488 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 TBCBQ99426 244 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 DDX23Q9BUQ8 820 aaKnown RBP16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 ADAM33Q9BZ11 813 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 ACBD3Q9H3P7 528 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 LRRC4Q9HBW1 653 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 CSNK1G1Q9HCP0 422 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 GRHL1Q9NZI5 618 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 DNAJB4Q9UDY4 337 aa16.33■□□□□ 0.21
LAPTM4A-201ENST00000175091 PARNO95453 639 aaKnown RBP16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 TFE3P19532 575 aaPredicted RBP16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 GBP1P32455 592 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 RPL21P46778 160 aaKnown RBP16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 ARSEP51690 589 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 RNASELQ05823 741 aaKnown RBP16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 PTK6Q13882 451 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 TRIM60Q495X7 471 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 ABI1Q8IZP0 508 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 SIX6OS1Q8N1H7 587 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 HSPH1Q92598 858 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 ZDHHC18Q9NUE0 388 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 PCDHB7Q9Y5E2 793 aa16.33■□□□□ 0.2
LAPTM4A-201ENST00000175091 HHLA1C9JL84 531 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 MDM4O15151 490 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 LIASO43766 372 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 GAS8O95995 478 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 OR1G1P47890 313 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 TKTL1P51854 596 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 CDR1P51861 262 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 YWHAHQ04917 246 aaPredicted RBP16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 ZDHHC24Q6UX98 284 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 BBS12Q6ZW61 710 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 ATL2Q8NHH9 583 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 CASD1Q96PB1 797 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 FAM193BQ96PV7 902 aaPredicted RBP16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 TMEM209Q96SK2 561 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 KCNK16Q96T55 309 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 FAM118BQ9BPY3 351 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 RHOBTB2Q9BYZ6 727 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 TMLHEQ9NVH6 421 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 FEZ2Q9UHY8 353 aaPredicted RBP16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 SNX24Q9Y343 169 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 NEU2Q9Y3R4 380 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 MYO16Q9Y6X6 1858 aa16.32■□□□□ 0.2
LAPTM4A-201ENST00000175091 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DCDC2CA8MYV0 355 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 FBXO21O94952 628 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 HSPA9P38646 679 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 MATKP42679 507 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 NDUFV1P49821 464 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 DAOAP59103 153 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 TSPY1Q01534 308 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 TLE2Q04725 743 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 PPP1R7Q15435 360 aa16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 MAPRE1Q15691 268 aaKnown RBP16.31■□□□□ 0.2
LAPTM4A-201ENST00000175091 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms