RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tatdn2B7ZNL9 783 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Serpini1O35684 410 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 SfnO70456 248 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Vav1P27870 845 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Serpina1eQ00898 413 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 4930430A15RikQ05AC5 485 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Itga1Q3V3R4 1179 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Capn11Q6J756 714 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 RfflQ6ZQM0 377 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 March4Q80TE3 409 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Usp6nlQ80XC3 819 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Senp7Q8BUH8 1037 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Dhx32Q8BZS9 744 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nudcd3Q8R1N4 363 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Olfr397Q8VEZ6 315 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nrbp2Q91V36 499 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Pcdha9Q91Y11 979 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Dkc1Q9ESX5 509 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 PorcnQ9JJJ7 461 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Limd1Q9QXD8 668 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm27029A2A4P4 543 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Atp8b4A2ANX3 1194 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm10250G3X9L6 160 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Spin2fJ3QPU0 254 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Vmn2r39L7N2E5 861 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Nedd9O35177 833 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 ZfxP17012 799 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 PdgfaP20033 211 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Stmn1P54227 149 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Scarf2P59222 833 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cntn3Q07409 1028 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 XiapQ60989 496 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ugt1a1Q63886 535 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Trim24Q64127 1051 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Serpinb3dQ6UKZ0 387 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 RimklbQ80WS1 387 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Znf598Q80YR4 908 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 SowahcQ8C0J6 512 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Taco1Q8K0Z7 294 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Pdk3Q922H2 415 aaKnown RBP12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Atp5hQ9DCX2 161 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rassf7Q9DD19 359 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Copg2Q9QXK3 871 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tk2Q9R088 270 aa12.03□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Kpna7C0LLJ0 499 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm20721E9Q2U8 318 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Gm20509G3UZF1 325 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Cyp2j6O54750 501 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 PtpraP18052 829 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 SftpdP50404 374 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Txndc8Q69AB2 127 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Chsy1Q6ZQ11 800 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 PolnQ7TQ07 864 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Slc17a6Q8BLE7 582 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Ephb1Q8CBF3 984 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Polr2bQ8CFI7 1174 aaKnown RBP12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Mcoln2Q8K595 566 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Olfr615Q8VGY4 313 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 AenQ9CZI9 336 aaKnown RBP12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Tekt1Q9DAJ2 418 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Igdcc4Q9EQS9 1252 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Actl7bQ9QY83 418 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Rtl9Q32KG4 1339 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Arhgef10Q8C033 1345 aa12.02□□□□□ -0.48
Col9a1-202ENSMUST00000088349 Farp1F8VPU2 1048 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Klf6O08584 283 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Taf1bP97358 586 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mif4gdQ3UBZ5 222 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Itm2aQ61500 263 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Q8CIL4 281 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mrpl58Q8R035 206 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Hkdc1Q91W97 915 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Gbp7Q91Z40 638 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 1700129C05RikQ9CQ77 218 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Rfx5Q9JL61 658 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Vmn2r103E9PWW0 856 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Cyp2c68K7N6C2 491 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 ChkaO54804 453 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mtco1P00397 514 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Tfdp1Q08639 410 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 LbpQ61805 481 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Bnip1Q6QD59 228 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Cand2Q6ZQ73 1235 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Lsm8Q6ZWM4 96 aaKnown RBP12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Znf12Q7TSI0 686 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Pgm5Q8BZF8 567 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Tfb1mQ8JZM0 345 aaKnown RBP12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Fcho1Q8K285 873 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mgat5Q8R4G6 740 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Pglyrp2Q8VCS0 530 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 DaglbQ91WC9 669 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Fgd4Q91ZT5 766 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Nde1Q9CZA6 344 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Oma1Q9D8H7 521 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Abcg8Q9DBM0 673 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Mrpl4Q9DCU6 294 aaKnown RBP12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Vwa7Q9JHA8 891 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Piwil1Q9JMB7 862 aa12.02□□□□□ -0.49
Col9a1-202ENSMUST00000088349 Dlc1Q9R0Z9 1092 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms