RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Prmt9Q3U3W5 846 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mif4gdQ3UBZ5 222 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Rcsd1Q3UZA1 412 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Psg28Q4KL66 472 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 PighQ5M9N4 188 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Foxn1Q61575 648 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tas2r102Q7M717 329 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gtpbp10Q8K013 366 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Smyd2Q8R5A0 433 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Olfr615Q8VGY4 313 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Sytl1Q99N80 567 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 4931406B18RikA2RSL7 367 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 1700064H15RikD3Z4D4 81 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccdc85cE9Q6B2 420 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kcng2F7A6P6 480 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kbtbd2G3X9X1 623 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Nr2c2P49117 596 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Shmt1P50431 478 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 S100a5P63084 93 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tfdp2Q64163 446 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gabbr2Q80T41 940 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Usp1Q8BJQ2 784 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 SowahcQ8C0J6 512 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kctd15Q8K0E1 283 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Map4k3Q99JP0 894 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Toe1Q9D2E2 511 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tmod2Q9JKK7 351 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cpsf3Q9QXK7 684 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pck1Q9Z2V4 622 aa10.19□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Serpinb3cA2RSF9 386 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kpna7C0LLJ0 499 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm10801F7C7Q0 168 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 AlpiF8VPQ6 554 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lta4hP24527 611 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pla2g6P97819 807 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cage1Q5IR70 849 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Adamts2Q8C9W3 1213 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mamdc2Q8CG85 686 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Nudcd3Q8R1N4 363 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q8R1Y2 203 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Olfr385Q8VGT1 312 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ndfip2Q91ZP6 311 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tceal1Q921P9 165 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fam212aQ9CX62 282 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Oma1Q9D8H7 521 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Actrt1Q9D9J3 376 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Actl7bQ9QY83 418 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Serpina3iD3Z450 408 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Apol11aE9PZG0 334 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Morc3F7BJB9 942 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Serpini1O35684 410 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Icam1P13597 537 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 M6prP24668 278 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gjb1P28230 283 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ptpn11P35235 597 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tfdp1Q08639 410 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Arid5aQ3U108 590 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Itm2aQ61500 263 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 RfflQ6ZQM0 377 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Atp6v0d2Q80SY3 350 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 FsbpQ8BKE5 299 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q8BZE1 841 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Trub1Q8C0D0 338 aaKnown RBP10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lin7aQ8JZS0 233 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tspan8Q8R3G9 235 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mgat5Q8R4G6 740 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 4930519G04RikQ9CPT7 205 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dtwd1Q9D8U7 304 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mpp5Q9JLB2 675 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ripk3Q9QZL0 486 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ptpn4Q9WU22 926 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 MycsQ9Z304 431 aa10.18□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ankfn1A0A140LIW7 1083 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Klhl41A2AUC9 606 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Olfr1305A2AVW3 312 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vmn2r103E9PWW0 856 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kcna3P16390 528 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gnat1P20612 350 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Glud1P26443 558 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ttc9Q3V038 219 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Trcg1Q58Y74 825 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cypt2Q6P924 180 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ip6k2Q80V72 448 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Slc17a6Q8BLE7 582 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kctd12bQ8C7J6 292 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dync1li1Q8R1Q8 523 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pglyrp2Q8VCS0 530 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ccdc103Q9D9P2 237 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Plscr2Q9DCW2 307 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 GmprQ9DCZ1 345 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cacna1fQ9JIS7 1985 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 0610012G03RikA0A0J9YTR2 95 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Zfp990B1AVN5 605 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm3414Q3TNU4 584 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Oog3Q3UWY1 500 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tmprss11eQ5S248 423 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 SnrpaQ62189 287 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Capn11Q6J756 714 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cand2Q6ZQ73 1235 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms